N-Pyridoxyl-2-Methylalanine-5-Phosphate
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Identification
- Generic Name
- N-Pyridoxyl-2-Methylalanine-5-Phosphate
- DrugBank Accession Number
- DB04241
- Background
Not Available
- Type
- Small Molecule
- Groups
- Experimental
- Structure
- Weight
- Average: 334.2622
Monoisotopic: 334.092987484 - Chemical Formula
- C12H19N2O7P
- Synonyms
- Not Available
Pharmacology
- Indication
Not Available
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- Pharmacodynamics
Not Available
- Mechanism of action
Target Actions Organism U2,2-dialkylglycine decarboxylase Not Available Pseudomonas cepacia - Absorption
Not Available
- Volume of distribution
Not Available
- Protein binding
Not Available
- Metabolism
- Not Available
- Route of elimination
Not Available
- Half-life
Not Available
- Clearance
Not Available
- Adverse Effects
- Improve decision support & research outcomesWith structured adverse effects data, including: blackbox warnings, adverse reactions, warning & precautions, & incidence rates. View sample adverse effects data in our new Data Library!Improve decision support & research outcomes with our structured adverse effects data.
- Toxicity
Not Available
- Pathways
- Not Available
- Pharmacogenomic Effects/ADRs
- Not Available
Interactions
- Drug Interactions
- This information should not be interpreted without the help of a healthcare provider. If you believe you are experiencing an interaction, contact a healthcare provider immediately. The absence of an interaction does not necessarily mean no interactions exist.Not Available
- Food Interactions
- Not Available
Categories
- Drug Categories
- Not Available
- Chemical TaxonomyProvided by Classyfire
- Description
- This compound belongs to the class of organic compounds known as pyridoxamine 5'-phosphates. These are heterocyclic aromatic compounds containing a pyridoxamine that carries a phosphate group at the 5'-position.
- Kingdom
- Organic compounds
- Super Class
- Organoheterocyclic compounds
- Class
- Pyridines and derivatives
- Sub Class
- Pyridoxamines
- Direct Parent
- Pyridoxamine 5'-phosphates
- Alternative Parents
- Alpha amino acids / Monoalkyl phosphates / Methylpyridines / Hydroxypyridines / Aralkylamines / Heteroaromatic compounds / Amino acids / Monocarboxylic acids and derivatives / Dialkylamines / Carboxylic acids show 5 more
- Substituents
- Alkyl phosphate / Alpha-amino acid / Alpha-amino acid or derivatives / Amine / Amino acid / Amino acid or derivatives / Aralkylamine / Aromatic heteromonocyclic compound / Azacycle / Carbonyl group show 19 more
- Molecular Framework
- Aromatic heteromonocyclic compounds
- External Descriptors
- Not Available
- Affected organisms
- Not Available
Chemical Identifiers
- UNII
- Not Available
- CAS number
- Not Available
- InChI Key
- NHGDGJKONAZETF-UHFFFAOYSA-N
- InChI
- InChI=1S/C12H19N2O7P/c1-7-10(15)9(5-14-12(2,3)11(16)17)8(4-13-7)6-21-22(18,19)20/h4,14-15H,5-6H2,1-3H3,(H,16,17)(H2,18,19,20)
- IUPAC Name
- 2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-2-methylpropanoic acid
- SMILES
- CC1=NC=C(COP(O)(O)=O)C(CNC(C)(C)C(O)=O)=C1O
References
- General References
- Not Available
- External Links
- PubChem Compound
- 445009
- PubChem Substance
- 46507871
- ChemSpider
- 392772
- ZINC
- ZINC000002046989
- PDBe Ligand
- NMA
- PDB Entries
- 1d7v
Clinical Trials
Pharmacoeconomics
- Manufacturers
- Not Available
- Packagers
- Not Available
- Dosage Forms
- Not Available
- Prices
- Not Available
- Patents
- Not Available
Properties
- State
- Solid
- Experimental Properties
- Not Available
- Predicted Properties
Property Value Source Water Solubility 0.992 mg/mL ALOGPS logP -1 ALOGPS logP -3.8 Chemaxon logS -2.5 ALOGPS pKa (Strongest Acidic) 1.06 Chemaxon pKa (Strongest Basic) 9.66 Chemaxon Physiological Charge -2 Chemaxon Hydrogen Acceptor Count 8 Chemaxon Hydrogen Donor Count 5 Chemaxon Polar Surface Area 149.21 Å2 Chemaxon Rotatable Bond Count 7 Chemaxon Refractivity 76.7 m3·mol-1 Chemaxon Polarizability 30.72 Å3 Chemaxon Number of Rings 1 Chemaxon Bioavailability 1 Chemaxon Rule of Five Yes Chemaxon Ghose Filter No Chemaxon Veber's Rule No Chemaxon MDDR-like Rule No Chemaxon - Predicted ADMET Features
Property Value Probability Human Intestinal Absorption - 0.974 Blood Brain Barrier - 0.8459 Caco-2 permeable - 0.6543 P-glycoprotein substrate Substrate 0.7479 P-glycoprotein inhibitor I Non-inhibitor 0.8045 P-glycoprotein inhibitor II Non-inhibitor 0.9615 Renal organic cation transporter Non-inhibitor 0.9189 CYP450 2C9 substrate Non-substrate 0.7205 CYP450 2D6 substrate Non-substrate 0.7889 CYP450 3A4 substrate Non-substrate 0.5619 CYP450 1A2 substrate Non-inhibitor 0.7628 CYP450 2C9 inhibitor Non-inhibitor 0.7906 CYP450 2D6 inhibitor Non-inhibitor 0.847 CYP450 2C19 inhibitor Non-inhibitor 0.7446 CYP450 3A4 inhibitor Non-inhibitor 0.8202 CYP450 inhibitory promiscuity Low CYP Inhibitory Promiscuity 0.8896 Ames test Non AMES toxic 0.6674 Carcinogenicity Non-carcinogens 0.8658 Biodegradation Not ready biodegradable 0.9761 Rat acute toxicity 2.3725 LD50, mol/kg Not applicable hERG inhibition (predictor I) Weak inhibitor 0.8888 hERG inhibition (predictor II) Non-inhibitor 0.6446
Spectra
- Mass Spec (NIST)
- Not Available
- Spectra
Spectrum Spectrum Type Splash Key Predicted GC-MS Spectrum - GC-MS Predicted GC-MS splash10-0002-9251000000-1ff7537166c2622f74ab Predicted MS/MS Spectrum - 10V, Positive (Annotated) Predicted LC-MS/MS splash10-000i-0049000000-46c15becdea8fd70858e Predicted MS/MS Spectrum - 10V, Negative (Annotated) Predicted LC-MS/MS splash10-002b-9031000000-69429f1d239f6ae177a2 Predicted MS/MS Spectrum - 20V, Positive (Annotated) Predicted LC-MS/MS splash10-001i-1982000000-b2931e06b0a95a083879 Predicted MS/MS Spectrum - 20V, Negative (Annotated) Predicted LC-MS/MS splash10-004i-9000000000-2c0e23e32e082d7e1719 Predicted MS/MS Spectrum - 40V, Positive (Annotated) Predicted LC-MS/MS splash10-00di-3900000000-58feeba43a37937c8ae6 Predicted MS/MS Spectrum - 40V, Negative (Annotated) Predicted LC-MS/MS splash10-004i-9000000000-e5ca6301a8ff3db7dc88 Predicted 1H NMR Spectrum 1D NMR Not Applicable Predicted 13C NMR Spectrum 1D NMR Not Applicable - Chromatographic Properties
Collision Cross Sections (CCS)
Adduct CCS Value (Å2) Source type Source [M-H]- 163.06886 predictedDeepCCS 1.0 (2019) [M+H]+ 165.42686 predictedDeepCCS 1.0 (2019) [M+Na]+ 173.2483 predictedDeepCCS 1.0 (2019)
Targets
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1. Details2,2-dialkylglycine decarboxylase
- Kind
- Protein
- Organism
- Pseudomonas cepacia
- Pharmacological action
- Unknown
- General Function
- Transaminase activity
- Specific Function
- The dialkylglycine decarboxylase is of interest because it normally catalyzes both decarboxylation and amino transfer. It may be more properly described as a decarboxylating aminotransferase rather...
- Gene Name
- dgdA
- Uniprot ID
- P16932
- Uniprot Name
- 2,2-dialkylglycine decarboxylase
- Molecular Weight
- 46443.91 Da
References
Drug created at June 13, 2005 13:24 / Updated at June 12, 2020 16:52