A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map.
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Oshima T, Aiba H, Baba T, Fujita K, Hayashi K, Honjo A, Ikemoto K, Inada T, Itoh T, Kajihara M, Kanai K, Kashimoto K, Kimura S, Kitagawa M, Makino K, Masuda S, Miki T, Mizobuchi K, Mori H, Motomura K, Nakamura Y, Nashimoto H, Nishio Y, Saito N, Horiuchi T, et al.
A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map.
DNA Res. 1996 Jun 30;3(3):137-55.
- PubMed ID
- 8905232 [ View in PubMed]
- Abstract
The 718,122 base pair sequence of the Escherichia coli K-12 genome corresponding to the region from 12.7 to 28.0 minutes on the genetic map is described. This region contains at least 681 potential open reading frames, of which 277 (41%) have been previously identified, 147 (22%) are homologous to other known genes, 139 (20%) are identical or similar to the hypothetical genes registered in databases, and the remaining 118 (17%) do not show a significant similarity to any other gene. In this region, we assigned a cluster of cit genes encoding multienzyme citrate lyase, two clusters of fimbrial genes and a set of lysogenic phage genes encoding integrase, excisionase and repressor in the e14 genetic element. In addition, a new valine tRNA gene, designated valZ, and a family of long directly repeated sequences, LDR-A, -B and -C, were found.
DrugBank Data that Cites this Article
- Polypeptides
Name UniProt ID 3-oxoacyl-[acyl-carrier-protein] synthase 3 P0A6R0 Details Oxygen-insensitive NADPH nitroreductase P17117 Details Pyruvate dehydrogenase [ubiquinone] P07003 Details 3-oxoacyl-[acyl-carrier-protein] synthase 2 P0AAI5 Details [Citrate [pro-3S]-lyase] ligase P77390 Details Aspartate aminotransferase P00509 Details Isocitrate dehydrogenase [NADP] P08200 Details Putrescine-binding periplasmic protein P31133 Details 3-phosphoshikimate 1-carboxyvinyltransferase P0A6D3 Details Galactose-1-phosphate uridylyltransferase P09148 Details Dihydroorotase P05020 Details Dihydroorotate dehydrogenase (quinone) P0A7E1 Details Outer membrane protein F P02931 Details Protein YceI P0A8X2 Details Cytidylate kinase P0A6I0 Details Oxygen-insensitive NAD(P)H nitroreductase P38489 Details Glucosamine-6-phosphate deaminase P0A759 Details Sugar phosphatase YbiV P75792 Details Glucose-1-phosphatase P19926 Details Formate acetyltransferase 1 P09373 Details Bifunctional protein PutA P09546 Details UDP-glucose 4-epimerase P09147 Details Lipid A palmitoyltransferase PagP P37001 Details Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive P0AB91 Details Spermidine/putrescine-binding periplasmic protein P0AFK9 Details Outer membrane protein A P0A910 Details Outer membrane protein X P0A917 Details Release factor glutamine methyltransferase P0ACC1 Details D-alanyl-D-alanine carboxypeptidase DacA P0AEB2 Details Thioredoxin reductase P0A9P4 Details 3-oxoacyl-[acyl-carrier-protein] reductase FabG P0AEK2 Details Probable phosphatase YcdX P75914 Details Molybdopterin synthase catalytic subunit P30749 Details Deoxyribodipyrimidine photo-lyase P00914 Details Alkyl hydroperoxide reductase subunit F P35340 Details Flavodoxin-1 P61949 Details Aminodeoxychorismate lyase P28305 Details O-acetyl-ADP-ribose deacetylase P0A8D6 Details Sensor protein PhoQ P23837 Details Potassium-transporting ATPase ATP-binding subunit P03960 Details Succinate dehydrogenase flavoprotein subunit P0AC41 Details Penicillin-binding protein 2 P0AD65 Details D-alanyl-D-alanine carboxypeptidase DacC P08506 Details Respiratory nitrate reductase 1 alpha chain P09152 Details Respiratory nitrate reductase 1 beta chain P11349 Details Respiratory nitrate reductase 1 gamma chain P11350 Details Aquaporin Z P60844 Details Succinate dehydrogenase iron-sulfur subunit P07014 Details Succinate dehydrogenase cytochrome b556 subunit P69054 Details Succinate dehydrogenase hydrophobic membrane anchor subunit P0AC44 Details 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase P0A6Q3 Details Acyl carrier protein P0A6A8 Details Fatty acid metabolism regulator protein P0A8V6 Details Outer-membrane lipoprotein LolB P61320 Details Leucyl/phenylalanyl-tRNA--protein transferase P0A8P1 Details Aminopeptidase N P04825 Details Disulfide bond formation protein B P0A6M2 Details Catecholate siderophore receptor Fiu P75780 Details ATP-dependent DNA helicase DinG P27296 Details