A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map.

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Itoh T, Aiba H, Baba T, Hayashi K, Inada T, Isono K, Kasai H, Kimura S, Kitakawa M, Kitagawa M, Makino K, Miki T, Mizobuchi K, Mori H, Mori T, Motomura K, Nakade S, Nakamura Y, Nashimoto H, Nishio Y, Oshima T, Saito N, Sampei G, Seki Y, Horiuchi T, et al.

A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map.

DNA Res. 1996 Dec 31;3(6):379-92.

PubMed ID
9097040 [ View in PubMed
]
Abstract

The 465,813 base pair sequence corresponding to the 40.1-50.0 min region on the genetic map of Escherichia coli K-12 (W3110) was determined. Analysis of the sequence revealed that this region contained at least 466 potential open reading frames, of which 187 (40%) were previously reported, 105 (23%) were homologous to other known genes, 103 (22%) were identical or similar to hypothetical genes registered in databases, and the remaining 71 (15%) did not show a significant similarity to any other gene. At the 45.2-46.0 min region, we found a very large cluster of about 30 genes, whose functions are involved in the biosynthesis of polysaccharides as the components of outer membranes. In addition, we identified a new asn-tRNA gene, designated asnW, between the asnT and asnU genes and a new lysogenic phage attachment site as the cis-element.

DrugBank Data that Cites this Article

Polypeptides
NameUniProt ID
Aminodeoxychorismate synthase component 1P05041Details
ATP phosphoribosyltransferaseP60757Details
Alpha,alpha-trehalose-phosphate synthase [UDP-forming]P31677Details
Histidinol-phosphate aminotransferaseP06986Details
Deoxycytidine triphosphate deaminaseP28248Details
Phosphoribosylglycinamide formyltransferase 2P33221Details
L-arabinose-binding periplasmic proteinP02924Details
UDP-galactopyranose mutaseP37747Details
Histidinol dehydrogenaseP06988Details
GDP-mannose mannosyl hydrolaseP32056Details
GDP-L-fucose synthaseP32055Details
Chemotaxis protein CheYP0AE67Details
AMP nucleosidaseP0AE12Details
KHG/KDPG aldolaseP0A955Details
EcotinP23827Details
Free methionine-R-sulfoxide reductaseP76270Details
Regulatory protein SdiAP07026Details
Outer membrane porin CP06996Details