Vanillate porin OpdK
Details
- Name
- Vanillate porin OpdK
- Synonyms
- Not Available
- Gene Name
- opdK
- Organism
- Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
- Amino acid sequence
>lcl|BSEQ0012766|Vanillate porin OpdK MKIRRKTAVPRNAGAVLPMLACLAAQAAEGGFLEDAKTDLVLRNYYFNRDFRDHDAGKSL VDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGVKLNSGRGTSNSELLPLHDDGRAADNYG RVGVAAKLRVSASELKIGEMLPDIPLLRYDDGRLLPQTFRGFAVVSRELPGLALQAGRFD AVSLRNSADMQDLSAWSAPTQKSDGFNYAGAEYRFNRERTQLGLWHGQLEDVYRQSYANL LHKQRVGDWTLGANLGLFVDRDDGAARAGEIDSHTVYGLFSAGIGLHTFYLGLQKVGGDS GWQSVYGSSGRSMGNDMFNGNFTNADERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATT KAGSGGKEWERDVELGYTVQSGPLARLNVRLNHASNRRSFNSDFDQTRLVVSYPLSW
- Number of residues
- 417
- Molecular Weight
- 45777.81
- Theoretical pI
- 7.79
- GO Classification
- Functionsporin activityComponentsintegral component of membrane
- General Function
- Porin activity
- Specific Function
- Not Available
- Pfam Domain Function
- OprD (PF03573)
- Transmembrane Regions
- Not Available
- Cellular Location
- Not Available
- Gene sequence
>lcl|BSEQ0012767|Vanillate porin OpdK (opdK) ATGAAAATCCGTCGTAAAACCGCAGTCCCGCGCAATGCAGGGGCGGTCCTGCCGATGCTC GCCTGTCTTGCCGCGCAAGCTGCCGAGGGCGGCTTCCTGGAGGATGCGAAGACCGACCTG GTCTTGCGCAACTATTACTTCAACCGCGATTTCCGCGACCACGATGCCGGCAAGAGCCTG GTGGACGAGTGGGCGCAGGGCTTCATCCTCAAGTTCAGTTCCGGCTATACCCCGGGCACG GTCGGCGTCGGCCTCGACGCCATCGGCCTGTTCGGCGTGAAGCTGAACAGCGGACGTGGC ACCAGCAATTCCGAGCTTCTTCCGTTGCACGATGACGGTCGCGCGGCGGACAACTATGGG CGTGTCGGCGTGGCCGCCAAGCTGCGCGTTTCGGCCAGCGAACTGAAGATCGGCGAGATG CTCCCGGACATTCCGCTGTTGCGCTACGACGACGGACGCCTGCTGCCGCAGACGTTCCGC GGCTTCGCCGTGGTTTCCCGCGAGCTGCCGGGCCTGGCTCTGCAGGCCGGACGCTTCGAC GCGGTGAGCCTGCGCAATTCGGCGGACATGCAGGACCTGTCGGCCTGGAGCGCGCCGACG CAGAAATCGGACGGTTTCAACTACGCCGGCGCCGAGTACCGCTTCAACCGCGAGCGCACC CAACTGGGCCTGTGGCACGGGCAACTGGAGGACGTCTACCGGCAGAGCTACGCCAACCTG CTGCACAAGCAGCGTGTCGGCGACTGGACCCTGGGCGCCAACCTCGGCCTGTTCGTCGAC CGCGACGACGGCGCCGCGCGCGCCGGAGAGATCGACAGCCATACCGTCTACGGCCTGTTT TCCGCCGGCATCGGCCTGCACACCTTCTACCTTGGCCTGCAGAAGGTCGGCGGCGACAGC GGCTGGCAATCGGTCTACGGCAGCAGTGGGCGGAGCATGGGCAACGACATGTTCAACGGC AACTTCACCAACGCCGACGAACGCTCCTGGCAGGTGCGCTACGACTACGATTTCGTCGGC CTCGGCTGGCCCGGCCTGATCGGCATGGTCCGCTACGGCCATGGCTCGAACGCCACCACC AAGGCCGGTAGCGGCGGCAAGGAATGGGAGCGCGATGTCGAGCTCGGCTACACCGTGCAG AGCGGTCCGCTGGCGCGGCTCAACGTGCGCCTCAACCACGCCAGCAACCGACGCAGCTTC AACAGCGACTTCGACCAGACGCGGCTGGTGGTGAGTTATCCGTTGTCGTGGTGA
- Chromosome Location
- Not Available
- Locus
- Not Available
- External Identifiers
Resource Link UniProtKB ID Q9HUR5 UniProtKB Entry Name Q9HUR5_PSEAE GenBank Protein ID 9945819 GenBank Gene ID AE004091 - General References
- Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FS, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL, Goltry L, Tolentino E, Westbrock-Wadman S, Yuan Y, Brody LL, Coulter SN, Folger KR, Kas A, Larbig K, Lim R, Smith K, Spencer D, Wong GK, Wu Z, Paulsen IT, Reizer J, Saier MH, Hancock RE, Lory S, Olson MV: Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. Nature. 2000 Aug 31;406(6799):959-64. [Article]
- Biswas S, Mohammad MM, Movileanu L, van den Berg B: Crystal structure of the outer membrane protein OpdK from Pseudomonas aeruginosa. Structure. 2008 Jul;16(7):1027-35. doi: 10.1016/j.str.2008.04.009. [Article]
- Eren E, Vijayaraghavan J, Liu J, Cheneke BR, Touw DS, Lepore BW, Indic M, Movileanu L, van den Berg B: Substrate specificity within a family of outer membrane carboxylate channels. PLoS Biol. 2012 Jan;10(1):e1001242. doi: 10.1371/journal.pbio.1001242. Epub 2012 Jan 17. [Article]