Photosystem II protein D1 1
Details
- Name
- Photosystem II protein D1 1
- Kind
- protein
- Synonyms
- 1.10.3.9
- Photosystem II Q(B) protein 1
- psbA-1
- PSII D1 protein 1
- Gene Name
- psbA1
- UniProtKB Entry
- P0A444Swiss-Prot
- Organism
- Thermosynechococcus elongatus (strain BP-1)
- NCBI Taxonomy ID
- 197221
- Amino acid sequence
>lcl|BSEQ0017076|Photosystem II protein D1 1 MTTTLQRRESANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVDI DGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFL LGASCYMGRQWELSYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTF NFMIVFQAEHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFG QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGVWFTALGISTMAFNLNGF NFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLASAESAPVAMIAPSING
- Number of residues
- 360
- Molecular Weight
- 39736.205
- Theoretical pI
- 5.92
- GO Classification
- Functionschlorophyll binding / electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity / metal ion binding / oxidoreductase activityProcessesphotosynthetic electron transport in photosystem II / protein-chromophore linkage / response to herbicideComponentsintegral component of membrane / photosystem II / thylakoid membrane
- General Function
- Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
- Specific Function
- chlorophyll binding
- Pfam Domain Function
- Photo_RC (PF00124)
- Signal Regions
- Not Available
- Transmembrane Regions
- 32-49 115-130 144-156 197-214 274-288
- Cellular Location
- Cellular thylakoid membrane
- Gene sequence
>lcl|BSEQ0017077|Photosystem II protein D1 1 (psbA1) ATGACCACAACTCTCCAACGTCGCGAAAGCGCGAATTTGTGGGAGCGGTTTTGTAACTGG GTGACGAGCACCGATAACCGCCTTTATGTGGGCTGGTTTGGGGTGATCATGATCCCCACC CTATTAGCCGCAACCATCTGCTTTGTGATTGCCTTCATCGCTGCTCCCCCTGTGGACATC GATGGCATCCGTGAGCCTGTTTCTGGCTCTTTGCTCTATGGCAACAACATCATCACGGGT GCAGTTGTCCCCTCTAGCAACGCCATTGGCTTGCACTTCTACCCCATTTGGGAAGCTGCT TCCCTCGATGAGTGGCTCTACAACGGTGGCCCCTACCAACTGATCATCTTCCACTTCCTG TTGGGTGCCTCCTGCTACATGGGTCGCCAGTGGGAACTCAGCTACCGCCTCGGTATGCGG CCTTGGATCTGCGTGGCCTACTCTGCCCCCCTGGCTTCTGCCTTTGCAGTCTTCTTGATC TACCCCATTGGTCAAGGCAGCTTCTCTGACGGGATGCCCCTCGGTATCTCTGGTACCTTC AACTTTATGATTGTGTTCCAAGCGGAGCACAACATTCTCATGCACCCCTTCCACCAACTG GGTGTAGCCGGTGTCTTTGGTGGGGCGCTGTTCTGCGCCATGCACGGTTCTCTGGTGACC TCCAGCTTGATCCGTGAAACCACCGAAACCGAATCCGCCAACTACGGTTACAAATTTGGT CAAGAGGAAGAAACCTACAACATCGTGGCTGCCCACGGTTACTTTGGCCGGTTGATCTTC CAATACGCCAGCTTCAACAACAGCCGCTCCCTGCACTTCTTCTTGGCCGCTTGGCCGGTG GTGGGTGTGTGGTTTACCGCCTTGGGGATCAGCACCATGGCCTTTAACCTGAATGGCTTC AACTTCAACCACTCGGTCATTGATGCCAAGGGCAACGTGATCAACACCTGGGCGGACATC ATCAACCGTGCCAACTTGGGTATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCC CTCGACTTGGCCAGCGCTGAGTCTGCTCCTGTGGCCATGATTGCTCCCAGCATCAACGGC TAA
- Chromosome Location
- Not Available
- Locus
- Not Available
- External Identifiers
Resource Link UniProtKB ID P0A444 UniProtKB Entry Name PSBA1_THEEB GenBank Gene ID BA000039 PDB ID(s) 1S5L, 1W5C, 2AXT, 3KZI, 4FBY, 4IXQ, 4IXR, 4PBU, 4PJ0, 4RVY, 4TNH, 4TNI, 4TNJ, 4TNK, 4V62, 4V82 KEGG ID tel:tlr1843 NCBI Gene ID 1010908 - General References
- Nakamura Y, Kaneko T, Sato S, Ikeuchi M, Katoh H, Sasamoto S, Watanabe A, Iriguchi M, Kawashima K, Kimura T, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Nakazaki N, Shimpo S, Sugimoto M, Takeuchi C, Yamada M, Tabata S: Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1. DNA Res. 2002 Aug 31;9(4):123-30. [Article]
- Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P: Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution. Nature. 2001 Feb 8;409(6821):739-43. [Article]
- Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S: Architecture of the photosynthetic oxygen-evolving center. Science. 2004 Mar 19;303(5665):1831-8. Epub 2004 Feb 5. [Article]
- Loll B, Kern J, Saenger W, Zouni A, Biesiadka J: Towards complete cofactor arrangement in the 3.0 A resolution structure of photosystem II. Nature. 2005 Dec 15;438(7070):1040-4. [Article]
- Guskov A, Kern J, Gabdulkhakov A, Broser M, Zouni A, Saenger W: Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride. Nat Struct Mol Biol. 2009 Mar;16(3):334-42. doi: 10.1038/nsmb.1559. Epub 2009 Feb 15. [Article]
- Broser M, Gabdulkhakov A, Kern J, Guskov A, Muh F, Saenger W, Zouni A: Crystal structure of monomeric photosystem II from Thermosynechococcus elongatus at 3.6-a resolution. J Biol Chem. 2010 Aug 20;285(34):26255-62. doi: 10.1074/jbc.M110.127589. Epub 2010 Jun 17. [Article]
- Broser M, Glockner C, Gabdulkhakov A, Guskov A, Buchta J, Kern J, Muh F, Dau H, Saenger W, Zouni A: Structural basis of cyanobacterial photosystem II Inhibition by the herbicide terbutryn. J Biol Chem. 2011 May 6;286(18):15964-72. doi: 10.1074/jbc.M110.215970. Epub 2011 Mar 2. [Article]
- Kern J, Alonso-Mori R, Hellmich J, Tran R, Hattne J, Laksmono H, Glockner C, Echols N, Sierra RG, Sellberg J, Lassalle-Kaiser B, Gildea RJ, Glatzel P, Grosse-Kunstleve RW, Latimer MJ, McQueen TA, DiFiore D, Fry AR, Messerschmidt M, Miahnahri A, Schafer DW, Seibert MM, Sokaras D, Weng TC, Zwart PH, White WE, Adams PD, Bogan MJ, Boutet S, Williams GJ, Messinger J, Sauter NK, Zouni A, Bergmann U, Yano J, Yachandra VK: Room temperature femtosecond X-ray diffraction of photosystem II microcrystals. Proc Natl Acad Sci U S A. 2012 Jun 19;109(25):9721-6. doi: 10.1073/pnas.1204598109. Epub 2012 Jun 4. [Article]
- Kern J, Alonso-Mori R, Tran R, Hattne J, Gildea RJ, Echols N, Glockner C, Hellmich J, Laksmono H, Sierra RG, Lassalle-Kaiser B, Koroidov S, Lampe A, Han G, Gul S, Difiore D, Milathianaki D, Fry AR, Miahnahri A, Schafer DW, Messerschmidt M, Seibert MM, Koglin JE, Sokaras D, Weng TC, Sellberg J, Latimer MJ, Grosse-Kunstleve RW, Zwart PH, White WE, Glatzel P, Adams PD, Bogan MJ, Williams GJ, Boutet S, Messinger J, Zouni A, Sauter NK, Yachandra VK, Bergmann U, Yano J: Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature. Science. 2013 Apr 26;340(6131):491-5. doi: 10.1126/science.1234273. Epub 2013 Feb 14. [Article]
- Kupitz C, Basu S, Grotjohann I, Fromme R, Zatsepin NA, Rendek KN, Hunter MS, Shoeman RL, White TA, Wang D, James D, Yang JH, Cobb DE, Reeder B, Sierra RG, Liu H, Barty A, Aquila AL, Deponte D, Kirian RA, Bari S, Bergkamp JJ, Beyerlein KR, Bogan MJ, Caleman C, Chao TC, Conrad CE, Davis KM, Fleckenstein H, Galli L, Hau-Riege SP, Kassemeyer S, Laksmono H, Liang M, Lomb L, Marchesini S, Martin AV, Messerschmidt M, Milathianaki D, Nass K, Ros A, Roy-Chowdhury S, Schmidt K, Seibert M, Steinbrener J, Stellato F, Yan L, Yoon C, Moore TA, Moore AL, Pushkar Y, Williams GJ, Boutet S, Doak RB, Weierstall U, Frank M, Chapman HN, Spence JC, Fromme P: Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser. Nature. 2014 Sep 11;513(7517):261-5. doi: 10.1038/nature13453. Epub 2014 Jul 9. [Article]
- Kern J, Tran R, Alonso-Mori R, Koroidov S, Echols N, Hattne J, Ibrahim M, Gul S, Laksmono H, Sierra RG, Gildea RJ, Han G, Hellmich J, Lassalle-Kaiser B, Chatterjee R, Brewster AS, Stan CA, Glockner C, Lampe A, DiFiore D, Milathianaki D, Fry AR, Seibert MM, Koglin JE, Gallo E, Uhlig J, Sokaras D, Weng TC, Zwart PH, Skinner DE, Bogan MJ, Messerschmidt M, Glatzel P, Williams GJ, Boutet S, Adams PD, Zouni A, Messinger J, Sauter NK, Bergmann U, Yano J, Yachandra VK: Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy. Nat Commun. 2014 Jul 9;5:4371. doi: 10.1038/ncomms5371. [Article]
Associated Data
- Drug Relations
Drug Drug group Pharmacological action? Type Actions Details Monogalactosyldiacylglycerol experimental unknown target Details