N-[4-(2-Methylimidazo[1,2-a]Pyridin-3-Yl)-2-Pyrimidinyl]Acetamide

Identification

Generic Name
N-[4-(2-Methylimidazo[1,2-a]Pyridin-3-Yl)-2-Pyrimidinyl]Acetamide
DrugBank Accession Number
DB02538
Background

Not Available

Type
Small Molecule
Groups
Experimental
Structure
Weight
Average: 267.2859
Monoisotopic: 267.112010063
Chemical Formula
C14H13N5O
Synonyms
Not Available

Pharmacology

Indication

Not Available

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Pharmacodynamics

Not Available

Mechanism of action
TargetActionsOrganism
UCyclin-dependent kinase 2Not AvailableHumans
Absorption

Not Available

Volume of distribution

Not Available

Protein binding

Not Available

Metabolism
Not Available
Route of elimination

Not Available

Half-life

Not Available

Clearance

Not Available

Adverse Effects
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Toxicity

Not Available

Pathways
Not Available
Pharmacogenomic Effects/ADRs
Not Available

Interactions

Drug Interactions
This information should not be interpreted without the help of a healthcare provider. If you believe you are experiencing an interaction, contact a healthcare provider immediately. The absence of an interaction does not necessarily mean no interactions exist.
Not Available
Food Interactions
Not Available

Categories

Drug Categories
Not Available
Chemical TaxonomyProvided by Classyfire
Description
This compound belongs to the class of organic compounds known as imidazopyridines. These are organic polycyclic compounds containing an imidazole ring fused to a pyridine ring. Imidazole is 5-membered ring consisting of three carbon atoms, and two nitrogen centers at the 1- and 3-positions. Pyridine is a 6-membered ring consisting of five carbon atoms and one nitrogen center.
Kingdom
Organic compounds
Super Class
Organoheterocyclic compounds
Class
Imidazopyridines
Sub Class
Not Available
Direct Parent
Imidazopyridines
Alternative Parents
N-acetylarylamines / Imidazo[1,2-a]pyridines / Pyrimidines and pyrimidine derivatives / Pyridines and derivatives / N-substituted imidazoles / Heteroaromatic compounds / Acetamides / Secondary carboxylic acid amides / Azacyclic compounds / Organopnictogen compounds
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Substituents
Acetamide / Aromatic heteropolycyclic compound / Azacycle / Azole / Carbonyl group / Carboxamide group / Carboxylic acid derivative / Heteroaromatic compound / Hydrocarbon derivative / Imidazo[1,2-a]pyridine
show 14 more
Molecular Framework
Aromatic heteropolycyclic compounds
External Descriptors
Not Available
Affected organisms
Not Available

Chemical Identifiers

UNII
Not Available
CAS number
Not Available
InChI Key
ZCRPPLDDHBLUES-UHFFFAOYSA-N
InChI
InChI=1S/C14H13N5O/c1-9-13(19-8-4-3-5-12(19)16-9)11-6-7-15-14(18-11)17-10(2)20/h3-8H,1-2H3,(H,15,17,18,20)
IUPAC Name
N-(4-{2-methylimidazo[1,2-a]pyridin-3-yl}pyrimidin-2-yl)acetamide
SMILES
CC(=O)NC1=NC(=CC=N1)C1=C(C)N=C2C=CC=CN12

References

General References
Not Available
PubChem Compound
447652
PubChem Substance
46508432
ChemSpider
394683
BindingDB
7642
ChEMBL
CHEMBL99842
PDBe Ligand
HDU
PDB Entries
1oiq

Clinical Trials

Clinical Trials
PhaseStatusPurposeConditionsCount

Pharmacoeconomics

Manufacturers
Not Available
Packagers
Not Available
Dosage Forms
Not Available
Prices
Not Available
Patents
Not Available

Properties

State
Solid
Experimental Properties
Not Available
Predicted Properties
PropertyValueSource
Water Solubility0.0371 mg/mLALOGPS
logP2.01ALOGPS
logP0.84Chemaxon
logS-3.9ALOGPS
pKa (Strongest Acidic)11.02Chemaxon
pKa (Strongest Basic)5.11Chemaxon
Physiological Charge0Chemaxon
Hydrogen Acceptor Count4Chemaxon
Hydrogen Donor Count1Chemaxon
Polar Surface Area72.18 Å2Chemaxon
Rotatable Bond Count2Chemaxon
Refractivity76.64 m3·mol-1Chemaxon
Polarizability28.3 Å3Chemaxon
Number of Rings3Chemaxon
Bioavailability1Chemaxon
Rule of FiveYesChemaxon
Ghose FilterYesChemaxon
Veber's RuleNoChemaxon
MDDR-like RuleNoChemaxon
Predicted ADMET Features
PropertyValueProbability
Human Intestinal Absorption+1.0
Blood Brain Barrier+0.9389
Caco-2 permeable+0.6853
P-glycoprotein substrateNon-substrate0.7376
P-glycoprotein inhibitor IInhibitor0.6484
P-glycoprotein inhibitor IIInhibitor0.5755
Renal organic cation transporterNon-inhibitor0.8263
CYP450 2C9 substrateNon-substrate0.81
CYP450 2D6 substrateNon-substrate0.8286
CYP450 3A4 substrateSubstrate0.5547
CYP450 1A2 substrateInhibitor0.8435
CYP450 2C9 inhibitorNon-inhibitor0.9376
CYP450 2D6 inhibitorNon-inhibitor0.9437
CYP450 2C19 inhibitorNon-inhibitor0.7891
CYP450 3A4 inhibitorNon-inhibitor0.7649
CYP450 inhibitory promiscuityLow CYP Inhibitory Promiscuity0.64
Ames testAMES toxic0.838
CarcinogenicityNon-carcinogens0.8668
BiodegradationNot ready biodegradable0.9951
Rat acute toxicity2.7479 LD50, mol/kg Not applicable
hERG inhibition (predictor I)Weak inhibitor0.9706
hERG inhibition (predictor II)Non-inhibitor0.6259
ADMET data is predicted using admetSAR, a free tool for evaluating chemical ADMET properties. (23092397)

Spectra

Mass Spec (NIST)
Not Available
Spectra
SpectrumSpectrum TypeSplash Key
Predicted GC-MS Spectrum - GC-MSPredicted GC-MSsplash10-00dl-2190000000-179230f0ff710a61556c
Predicted MS/MS Spectrum - 10V, Positive (Annotated)Predicted LC-MS/MSsplash10-014i-0090000000-aa57588136b6edc24ff8
Predicted MS/MS Spectrum - 10V, Negative (Annotated)Predicted LC-MS/MSsplash10-01b9-0090000000-8f317a699c6a3b8492e9
Predicted MS/MS Spectrum - 20V, Positive (Annotated)Predicted LC-MS/MSsplash10-014i-0190000000-f2a2385f89eb16f3d75b
Predicted MS/MS Spectrum - 20V, Negative (Annotated)Predicted LC-MS/MSsplash10-00kb-0090000000-2b4e1df30bd5cd20e881
Predicted MS/MS Spectrum - 40V, Negative (Annotated)Predicted LC-MS/MSsplash10-0fsj-4980000000-d42d5d030f60c691ea29
Predicted MS/MS Spectrum - 40V, Positive (Annotated)Predicted LC-MS/MSsplash10-0a4i-0940000000-34f7374f20f3a07c3697
Predicted 1H NMR Spectrum1D NMRNot Applicable
Predicted 13C NMR Spectrum1D NMRNot Applicable
Chromatographic Properties
Collision Cross Sections (CCS)
AdductCCS Value (Å2)Source typeSource
[M-H]-172.7102078
predicted
DarkChem Lite v0.1.0
[M-H]-157.67787
predicted
DeepCCS 1.0 (2019)
[M+H]+172.3795078
predicted
DarkChem Lite v0.1.0
[M+H]+160.03587
predicted
DeepCCS 1.0 (2019)
[M+Na]+172.5673078
predicted
DarkChem Lite v0.1.0
[M+Na]+166.12901
predicted
DeepCCS 1.0 (2019)

Targets

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Details
1. Cyclin-dependent kinase 2
Kind
Protein
Organism
Humans
Pharmacological action
Unknown
General Function
Metal ion binding
Specific Function
Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, N...
Gene Name
CDK2
Uniprot ID
P24941
Uniprot Name
Cyclin-dependent kinase 2
Molecular Weight
33929.215 Da
References
  1. Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
  2. Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]
  3. Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. [Article]

Drug created at June 13, 2005 13:24 / Updated at August 01, 2020 13:43