Phosphotriesterase

Details

Name
Phosphotriesterase
Kind
protein
Synonyms
Not Available
Gene Name
opdA
UniProtKB Entry
Q93LD7TrEMBL
Organism
Agrobacterium tumefaciens
NCBI Taxonomy ID
358
Amino acid sequence
>lcl|BSEQ0019412|Phosphotriesterase
MQTRRDALKSAAAITLLGGLAGCASMARPIGTGDLINTVRGPIPVSEAGFTLTHEHICGS
SAGFLRAWPEFFGSRKALAEKAVRGLRHARSAGVQTIVDVSTFDIGRDVRLLAEVSRAAD
VHIVAATGLWFDPPLSMRMRSVEELTQFFLREIQHGIEDTGIRAGIIKVATTGKATPFQE
LVLKAAARASLATGVPVTTHTSASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLT
GLAARGYLVGLDRMPYSAIGLEGNASALALFGTRSWQTRALLIKALIDRGYKDRILVSHD
WLFGFSSYVTNIMDVMDRINPDGMAFVPLRVIPFLREKGVPPETLAGVTVANPARFLSPT
VRAVVTRSETSRPAAPIPRQDTER
Number of residues
384
Molecular Weight
41362.905
Theoretical pI
9.17
GO Classification
Functions
hydrolase activity, acting on ester bonds / zinc ion binding
Processes
catabolic process
General Function
Not Available
Specific Function
hydrolase activity, acting on ester bonds
Pfam Domain Function
Signal Regions
1-27
Transmembrane Regions
Not Available
Cellular Location
Cytoplasmic
Gene sequence
>lcl|BSEQ0006533|1155 bp
ATGCAAACGAGAAGAGATGCACTTAAGTCTGCGGCCGCAATAACTCTGCTCGGCGGCTTG
GCTGGGTGTGCAAGCATGGCCCGACCAATCGGTACAGGCGATCTGATTAATACTGTTCGC
GGCCCCATTCCAGTTTCGGAAGCGGGCTTCACACTGACCCATGAGCATATCTGCGGCAGT
TCGGCGGGATTCCTACGTGCGTGGCCGGAGTTTTTCGGTAGCCGCAAAGCTCTAGCGGAA
AAGGCTGTGAGAGGATTACGCCATGCCAGATCGGCTGGCGTGCAAACCATCGTCGATGTG
TCGACTTTCGATATCGGTCGTGACGTCCGTTTATTGGCCGAAGTTTCGCGGGCCGCCGAC
GTGCATATCGTGGCGGCGACTGGCTTATGGTTCGACCCGCCACTTTCAATGCGAATGCGC
AGCGTCGAAGAACTGACCCAGTTCTTCCTGCGTGAAATCCAACATGGCATCGAAGACACC
GGTATTAGGGCGGGCATTATCAAGGTCGCGACCACAGGGAAGGCGACCCCCTTTCAAGAG
TTGGTGTTAAAGGCAGCCGCGCGGGCCAGCTTGGCCACCGGTGTTCCGGTAACCACTCAC
ACGTCAGCAAGTCAGCGCGATGGCGAGCAGCAGGCAGCCATATTTGAATCCGAAGGTTTG
AGCCCCTCACGGGTTTGTATCGGTCACAGCGATGATACTGACGATTTGAGCTACCTAACC
GGCCTCGCTGCGCGCGGATACCTCGTCGGTTTAGATCGCATGCCGTACAGTGCGATTGGT
CTAGAAGGCAATGCGAGTGCATTAGCGCTCTTTGGTACTCGGTCGTGGCAAACAAGGGCT
CTCTTGATCAAGGCGCTCATCGACCGAGGCTACAAGGATCGAATCCTCGTCTCCCATGAC
TGGCTGTTCGGGTTTTCGAGCTATGTCACGAACATCATGGACGTAATGGATCGCATAAAC
CCAGATGGAATGGCCTTCGTCCCTCTGAGAGTGATCCCATTCCTACGAGAGAAGGGCGTC
CCGCCGGAAACGCTAGCAGGCGTAACCGTGGCCAATCCCGCGCGGTTCTTGTCACCGACC
GTGCGGGCCGTCGTGACACGATCTGAAACTTCCCGCCCTGCCGCGCCTATTCCCCGTCAA
GATACCGAACGATGA
Chromosome Location
Not Available
Locus
Not Available
External Identifiers
ResourceLink
UniProtKB IDQ93LD7
UniProtKB Entry NameQ93LD7_RHIRD
GenBank Gene IDAY043245
PDB ID(s)2D2G, 2D2H, 2D2J, 2R1K, 2R1L, 2R1M, 2R1N, 2R1P, 3A3W, 3A3X, 3A4J, 3C86, 3OOD, 3OQE, 3SO7, 3WML, 4NP7
General References
  1. Jackson C, Kim HK, Carr PD, Liu JW, Ollis DL: The structure of an enzyme-product complex reveals the critical role of a terminal hydroxide nucleophile in the bacterial phosphotriesterase mechanism. Biochim Biophys Acta. 2005 Aug 31;1752(1):56-64. [Article]
  2. Jackson CJ, Foo JL, Kim HK, Carr PD, Liu JW, Salem G, Ollis DL: In crystallo capture of a Michaelis complex and product-binding modes of a bacterial phosphotriesterase. J Mol Biol. 2008 Feb 1;375(5):1189-96. Epub 2007 Nov 1. [Article]
  3. Jackson CJ, Foo JL, Tokuriki N, Afriat L, Carr PD, Kim HK, Schenk G, Tawfik DS, Ollis DL: Conformational sampling, catalysis, and evolution of the bacterial phosphotriesterase. Proc Natl Acad Sci U S A. 2009 Dec 22;106(51):21631-6. doi: 10.1073/pnas.0907548106. Epub 2009 Dec 4. [Article]
  4. Ely F, Hadler KS, Gahan LR, Guddat LW, Ollis DL, Schenk G: The organophosphate-degrading enzyme from Agrobacterium radiobacter displays mechanistic flexibility for catalysis. Biochem J. 2010 Dec 15;432(3):565-73. doi: 10.1042/BJ20101054. [Article]
  5. Ely F, Pedroso MM, Gahan LR, Ollis DL, Guddat LW, Schenk G: Phosphate-bound structure of an organophosphate-degrading enzyme from Agrobacterium radiobacter. J Inorg Biochem. 2012 Jan;106(1):19-22. doi: 10.1016/j.jinorgbio.2011.09.015. Epub 2011 Sep 17. [Article]
  6. Naqvi T, Warden AC, French N, Sugrue E, Carr PD, Jackson CJ, Scott C: A 5000-fold increase in the specificity of a bacterial phosphotriesterase for malathion through combinatorial active site mutagenesis. PLoS One. 2014 Apr 10;9(4):e94177. doi: 10.1371/journal.pone.0094177. eCollection 2014. [Article]

Associated Data

Drug Relations
DrugDrug groupPharmacological action?TypeActionsDetails
DIMETHYL THIOPHOSPHATEexperimentalunknowntargetDetails
O,O-DIETHYL HYDROGEN THIOPHOSPHATEexperimentalunknowntargetDetails
DIETHYL 4-METHOXYPHENYL PHOSPHATEexperimentalunknowntargetDetails