Genome polyprotein

Details

Name
Genome polyprotein
Synonyms
  • 3.4.22.29
  • P2A
Gene Name
Not Available
Organism
SVDV
Amino acid sequence
>lcl|BSEQ0012956|Genome polyprotein
MGAQVSTQKTGAHETSLSAAGNSVIHYTNINYYKDAASNSANRQDFTQDPGKFTEPVKDI
MVKSMPALNSPSAEECGYSDRVRSITLGNSTITTQECANVVVGYGVWPTYLKDEEATAED
QPTQPDVATCRFYTLESVMWQQSSPGWWWKFPDALSNMGLFGQNMQYHYLGRAGYTIHVQ
CNASKFHQGCLLVVCVPEAEMGCATLANKPDPKSLSKGEIANMFESQNSTGETAVQANVI
NAGMGVGVGNLTIFPHQWINLRTNNSATIVMPYINSVPMDNMFRHNNFTLMVIPFAPLSY
STGATTYVPITVTVAPMCAEYNGLRLAGKQGLPTLSTPGSNQFLTSDDFQSPSAMPQFDV
TPEMDIPGQVNNLMEIAEVDSVVPVNNTEGKVMSIEAYQIPVQSNPTNGSQVFGFPLTPG
ANSVLNRTLLGEILNYYAHWSGSIKLTFMFCGSAMATGKFLLAYSPPGAGAPTTRKEAML
GTHVIWDVGLQSSCVLCIPWISQTHYRYVVMDEYTAGGYITCWYQTNIVVPADAQSDCKI
LCFVSACNDFSVRMLKDTPFIKQDNFFQGPPGEVMGRAIARVADTIGSGPVNSESIPALT
AAETGHTSQVVPSDTMQTRHVKNYHSRSESTVENFLCRSACVFYTTYKNHDSDGDNFAYW
VINTRQVAQLRRKLEMFTYARFDLELTFVITSTQEQPTVRGQDAPVLTHQIMYVPPGGPV
PTKVNSYSWQTSTNPSVFWTEGSAPPRMSIPFIGIGNAYSMFYDGWARFDKQGTYGISTL
NNMGTLYMRHVNDGGPGPIVSTVRIYFKPKHVKTWVPRPPRLCQYQKAGNVNFEPTGVTE
GRTDITTMKTTGAFGQQSGAVYVGNYRVVNRHLATRADWQNCVWEDYNRDLLVSTTTAHG
CDTIARCDCTAGVYFCASRNKHYPVTFEGPGLVEVQESEYYPKKYQSHVLLAAGFAEPGD
CGGILRCQHGVIGIVTVGGEGVVGFADVRDLLWLEDDAMEQGVRDYVEQLGNCFGSGFTN
QICEQVTLLKESLIGQDSILEKSLKALVKIVSALVIVVRNHDDLITVTATLALIGCTTSP
WRWLKQKVSQYYGIPMAERQNSGWLKKFTEMTNACKGMEWIAIKIQKFIEWLKVKILPEV
KEKHEFLNRLKQLPLLESQIATIEQSAPSQSDQEQLFSNVQYFAHYCRKYAPLYAAEAKR
VFSLEKKMSNYIQFKSKCRIEPVCLLLHGSPGAGKSVATNLIGRSLAEKLNSSVYSLPPD
PDHFDGYKQQAVVIMDDLCQNPDGKDVSLFCQMVSSVDFVPPMAALEEKGILFTSPFVLA
STNAGSVNAPTVSDSRALVRRFHFDMNIEVVSMYSQNGKINMPMAVKTCDEECCPVNFKK
CCPLVCGKAIQFIDRRTQVRYSLDMLVTEMFREYNHRHSVGATLEALFQGPPVYREIKIS
VAPETPPPPAVADLLKSVDSEAVREYCKEKGWLIPEVDSTLQIEKHVNRAFICLQALTTF
VSVAGIIYIIYKLFAGFQGAYTGMPNQKPRVPTLRQAKVQGPAFEFAVAMMKRNASTVKT
EYGEFTMLGIYDRWAVLPRHAKPGPTILMNDQVVGVLDAKELVDKDGTNLELTLLKLNRN
EKFRDIRGFLAREEVEVNEAVLAINTSKFPNMYIPVGRVTDYGFLNLGGTPTKRMLMYNF
PTRAGQCGGVLMSTGKVLGIHVGGNGHQGFSAALLRHYFNEEQGEIEFIESSKDAGFPVI
NTPSKTKLEPSVFHHVFEGNKEPAVLRNGDPRLKANFEEAIFSKYIGNVNTHVDEYMMEA
VDHYAGQLATLDISTEPMKLEDAVYGTEGLEALDLTTSAGYPYVALGIKKRDILSKKTRD
LTKLKECMDKYGLNLPMVTYVKDELRSADKVAKGKSRLIEASSLNDSVAMRQTFGNLYKT
FHLNPGIVTGSAVGCDPDVFWSKIPVMLDGHLIAFDYSGYDASLSPVWFTCLKLLLEKLG
YTNKETNYIDYLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKGI
DLDQFRMIAYGDDVIASYPWPIDASLLAEAGKDYGLIMTPADKGECFNEVTWTNVTFLKR
YFRADEQYPFLVHPVMPMKDIHESIRWTKDPKNTQDHVRSLCLLAWHNGEHEYEEFIRKI
RSVRVGRCLSLPAFSTLRRKWLDSF
Number of residues
2185
Molecular Weight
243363.48
Theoretical pI
6.9
GO Classification
Functions
ATP binding / cysteine-type endopeptidase activity / ion channel activity / RNA binding / RNA helicase activity / RNA-directed RNA polymerase activity / structural molecule activity
Processes
DNA replication / endocytosis involved in viral entry into host cell / induction by virus of host autophagy / pore formation by virus in membrane of host cell / pore-mediated entry of viral genome into host cell / positive stranded viral RNA replication / protein oligomerization / RNA-protein covalent cross-linking / suppression by virus of host gene expression / suppression by virus of host mRNA export from nucleus / suppression by virus of host RIG-I activity by RIG-I proteolysis / suppression by virus of host translation initiation factor activity / transcription, DNA-templated / viral RNA genome replication / virion attachment to host cell
Components
host cell cytoplasmic vesicle membrane / integral to membrane of host cell / membrane / T=pseudo3 icosahedral viral capsid
General Function
Structural molecule activity
Specific Function
Capsid protein VP1: Forms an icosahedral capsid of pseudo T=3 symmetry with capsid proteins VP2 and VP3. The capsid is 300 Angstroms in diameter, composed of 60 copies of each capsid protein and enclosing the viral positive strand RNA genome. Capsid protein VP1 mainly forms the vertices of the capsid. Capsid protein VP1 interacts with host CXADR to provide virion attachment to target host cells. This attachment induces virion internalization. Tyrosine kinases are probably involved in the entry process. After binding to its receptor, the capsid undergoes conformational changes. Capsid protein VP1 N-terminus (that contains an amphipathic alpha-helix) and capsid protein VP4 are externalized. Together, they shape a pore in the host membrane through which viral genome is translocated to host cell cytoplasm. After genome has been released, the channel shrinks (By similarity).Capsid protein VP2: Forms an icosahedral capsid of pseudo T=3 symmetry with capsid proteins VP2 and VP3. The capsid is 300 Angstroms in diameter, composed of 60 copies of each capsid protein and enclosing the viral positive strand RNA genome (By similarity).Capsid protein VP3: Forms an icosahedral capsid of pseudo T=3 symmetry with capsid proteins VP2 and VP3. The capsid is 300 Angstroms in diameter, composed of 60 copies of each capsid protein and enclosing the viral positive strand RNA genome (By similarity).Capsid protein VP4: Lies on the inner surface of the capsid shell. After binding to the host receptor, the capsid undergoes conformational changes. Capsid protein VP4 is released, Capsid protein VP1 N-terminus is externalized, and together, they shape a pore in the host membrane through which the viral genome is translocated into the host cell cytoplasm. After genome has been released, the channel shrinks (By similarity).Capsid protein VP0: Component of immature procapsids, which is cleaved into capsid proteins VP4 and VP2 after maturation. Allows the capsid to remain inactive before the maturation step (By similarity).Protein 2A: Cysteine protease that cleaves viral polyprotein and specific host proteins. It is responsible for the cleavage between the P1 and P2 regions, first cleavage occurring in the polyprotein. Cleaves also the host translation initiation factor EIF4G1, in order to shut down the capped cellular mRNA translation. Inhibits the host nucleus-cytoplasm protein and RNA trafficking by cleaving host members of the nuclear pores (By similarity).Protein 2B: Plays an essential role in the virus replication cycle by acting as a viroporin. Creates a pore in the host reticulum endoplasmic and as a consequence releases Ca2+ in the cytoplasm of infected cell. In turn, high levels of cyctoplasmic calcium may trigger membrane trafficking and transport of viral ER-associated proteins to viroplasms, sites of viral genome replication (By similarity).Protein 2C: Induces and associates with structural rearrangements of intracellular membranes. Displays RNA-binding, nucleotide binding and NTPase activities. May play a role in virion morphogenesis and viral RNA encapsidation by interacting with the capsid protein VP3 (By similarity).Protein 3AB: Localizes the viral replication complex to the surface of membranous vesicles. Together with protein 3CD binds the Cis-Active RNA Element (CRE) which is involved in RNA synthesis initiation. Acts as a cofactor to stimulate the activity of 3D polymerase, maybe through a nucleid acid chaperone activity (By similarity).Protein 3A: Localizes the viral replication complex to the surface of membranous vesicles. It inhibits host cell endoplasmic reticulum-to-Golgi apparatus transport and causes the dissassembly of the Golgi complex, possibly through GBF1 interaction. This would result in depletion of MHC, trail receptors and IFN receptors at the host cell surface (By similarity).Viral protein genome-linked: acts as a primer for viral RNA replication and remains covalently bound to viral genomic RNA. VPg is uridylylated prior to priming replication into VPg-pUpU. The oriI viral genomic sequence may act as a template for this. The VPg-pUpU is then used as primer on the genomic RNA poly(A) by the RNA-dependent RNA polymerase to replicate the viral genome. VPg may be removed in the cytoplasm by an unknown enzyme termed "unlinkase". VPg is not cleaved off virion genomes because replicated genomic RNA are encapsidated at the site of replication (By similarity).Protein 3CD: Is involved in the viral replication complex and viral polypeptide maturation. It exhibits protease activity with a specificity and catalytic efficiency that is different from protease 3C. Protein 3CD lacks polymerase activity. The 3C domain in the context of protein 3CD may have an RNA binding activity (By similarity).Protease 3C: cleaves host DDX58/RIG-I and thus contributes to the inhibition of type I interferon production. Cleaves also host PABPC1 (By similarity).RNA-directed RNA polymerase: Replicates the viral genomic RNA on the surface of intracellular membranes. May form linear arrays of subunits that propagate along a strong head-to-tail interaction called interface-I. Covalently attaches UMP to a tyrosine of VPg, which is used to prime RNA synthesis. The positive stranded RNA genome is first replicated at virus induced membranous vesicles, creating a dsRNA genomic replication form. This dsRNA is then used as template to synthesize positive stranded RNA genomes. ss(+)RNA genomes are either translated, replicated or encapsidated (By similarity).
Pfam Domain Function
Transmembrane Regions
Not Available
Cellular Location
Virion
Gene sequence
>lcl|BSEQ0008057|6558 bp
ATGGGAGCTCAAGTGTCAACACAAAAGACCGGTGCTCATGAGACCAGCTTGAGTGCAGCG
GGCAACTCAGTCATTCATTACACAAACATAAACTACTACAAGGATGCTGCTTCGAATTCA
GCAAATAGACAAGACTTCACACAGGACCCGGGGAAGTTCACCGAACCTGTGAAAGACATC
ATGGTCAAATCCATGCCTGCTCTCAATTCCCCATCAGCAGAGGAGTGTGGCTACAGTGAC
AGGGTAAGATCCATCACCTTAGGGAATTCGACCATAACAACTCAAGAATGTGCAAACGTG
GTAGTTGGATATGGGGTGTGGCCAACTTACTTGAAGGATGAAGAGGCAACAGCAGAGGAT
CAACCCACTCAACCAGATGTGGCCACGTGCAGGTTTTACACGCTCGAATCCGTGATGTGG
CAACAGAGTTCACCAGGCTGGTGGTGGAAGTTCCCTGACGCGTTGTCCAACATGGGGCTA
TTTGGGCAAAATATGCAGTACCACTACCTTGGGAGAGCCGGATACACGATACACGTGCAG
TGCAACGCGTCCAAATTTCACCAAGGGTGTCTGCTGGTGGTATGTGTGCCAGAAGCAGAG
ATGGGGTGTGCCACGTTGGCCAATAAGCCTGACCCAAAAAGCCTGAGTAAAGGGGAAATA
GCCAACATGTTTGAATCCCAAAACTCCACCGGGGAAACGGCCGTGCAAGCTAATGTGATC
AATGCTGGCATGGGTGTTGGTGTTGGTAATCTAACTATCTTCCCCCATCAGTGGATCAAC
TTGCGCACTAACAACAGCGCTACGATTGTCATGCCATATATAAACAGCGTGCCCATGGAC
AACATGTTCAGACACAACAATTTTACACTCATGGTCATCCCGTTCGCCCCACTGAGCTAC
AGCACAGGGGCTACCACGTACGTACCAATCACTGTAACAGTGGCGCCAATGTGCGCTGAA
TATAATGGGCTGCGTCTGGCCGGCAAGCAAGGTTTACCAACGCTGTCGACACCCGGGAGC
AACCAGTTTCTCACGTCCGATGACTTCCAGTCACCATCAGCCATGCCACAATTCGATGTC
ACTCCTGAGATGGATATTCCAGGACAAGTCAACAACTTGATGGAGATTGCAGAAGTAGAT
TCTGTAGTGCCTGTAAATAACACAGAAGGGAAAGTGATGTCAATTGAGGCATACCAGATA
CCTGTGCAATCGAATCCAACCAACGGTTCTCAGGTTTTTGGGTTCCCATTGACCCCAGGG
GCCAATAGTGTGTTAAACAGGACTTTGCTGGGAGAAATCTTAAACTACTATGCCCATTGG
TCAGGCAGCATCAAACTAACATTTATGTTTTGCGGGTCAGCGATGGCTACAGGAAAATTC
TTACTGGCGTACTCACCACCGGGAGCTGGGGCACCGACCACACGCAAGGAGGCGATGCTA
GGTACTCACGTGATCTGGGATGTGGGTCTACAATCGAGCTGCGTATTGTGTATACCATGG
ATTAGTCAAACGCACTACAGGTATGTAGTAATGGATGAATACACCGCTGGTGGATACATA
ACTTGCTGGTATCAAACAAATATTGTGGTGCCTGCAGATGCACAGAGTGACTGTAAGATC
TTGTGTTTTGTGTCGGCATGTAACGATTTTTCAGTTAGGATGCTCAAGGACACACCCTTT
ATAAAACAGGATAATTTCTTCCAAGGGCCCCCAGGAGAGGTGATGGGAAGAGCCATTGCC
CGCGTCGCTGATACCATTGGGAGCGGACCAGTTAACTCGGAATCCATTCCAGCCCTAACC
GCCGCAGAGACAGGGCACACGTCACAAGTTGTACCATCAGACACAATGCAAACTAGACAC
GTGAAGAATTACCATTCAAGATCAGAGTCGACAGTGGAGAACTTCCTGTGCAGATCTGCA
TGCGTCTTCTACACCACATACAAGAACCATGACTCCGATGGCGACAACTTCGCCTACTGG
GTGATCAACACACGGCAAGTTGCTCAACTGCGTCGGAAGCTCGAAATGTTCACGTACGCA
AGATTTGATCTGGAGTTGACCTTCGTGATCACTAGCACTCAGGAACAACCCACCGTTCGA
GGTCAAGATGCACCAGTGCTCACCCACCAAATAATGTATGTACCTCCAGGTGGTCCAGTA
CCCACAAAGGTAAACAGCTACAGCTGGCAAACGTCCACCAACCCGAGTGTGTTCTGGACG
GAAGGGAGCGCACCGCCTCGAATGTCGATACCATTCATTGGCATAGGCAACGCATACAGC
ATGTTCTATGACGGGTGGGCCAGGTTTGACAAGCAAGGGACATACGGCATCAGCACATTA
AACAACATGGGGACACTATATATGAGACATGTGAATGATGGGGGTCCCGGTCCCATTGTA
AGCACAGTACGAATTTACTTCAAGCCAAAGCACGTCAAAACGTGGGTCCCAAGACCGCCC
AGACTATGTCAATACCAAAAGGCTGGCAACGTGAATTTTGAACCCACTGGTGTGACTGAG
GGTAGGACAGATATAACAACCATGAAAACCACTGGCGCCTTCGGGCAGCAGTCTGGTGCC
GTGTACGTTGGCAACTATAGAGTGGTGAATAGACATCTCGCAACGCGCGCGGACTGGCAA
AACTGTGTGTGGGAAGACTACAACAGAGACCTTCTAGTGAGCACCACCACTGCACATGGC
TGCGACACCATTGCCAGGTGTGATTGCACAGCAGGAGTGTACTTCTGCGCCTCCAGAAAC
AAGCACTATCCAGTCACATTTGAGGGGCCCGGTCTTGTGGAGGTTCAAGAGAGTGAGTAT
TACCCGAAAAAGTACCAATCCCATGTACTGCTCGCAGCTGGATTTGCAGAGCCGGGTGAT
TGTGGAGGGATTCTCAGATGCCAACATGGGGTGATTGGCATAGTTACCGTGGGGGGGGAA
GGTGTTGTTGGTTTTGCCGATGTAAGAGACTTGTTGTGGCTGGAGGACGACGCCATGGAG
CAAGGAGTTAGGGATTATGTGGAACAACTCGGCAACTGCTTCGGCTCAGGATTCACCAAT
CAAATTTGCGAACAGGTTACCCTTCTAAAAGAGTCGTTAATTGGACAGGATTCTATCCTT
GAGAAGTCTCTCAAGGCCCTCGTCAAGATAGTATCAGCACTCGTGATCGTGGTGAGAAAT
CACGATGACCTCATTACGGTCACCGCCACACTGGCGTTAATAGGATGCACTACCTCACCA
TGGCGCTGGCTCAAGCAGAAAGTGTCTCAGTACTATGGCATCCCCATGGCTGAAAGGCAA
AATAGTGGCTGGTTAAAGAAGTTCACAGAGATGACCAATGCCTGTAAGGGCATGGAGTGG
ATAGCCATCAAGATCCAAAAATTCATAGAGTGGTTGAAGGTTAAGATCCTGCCAGAAGTC
AAGGAAAAGCATGAGTTCCTCAACAGGCTTAAACAACTACCACTCTTGGAAAGTCAAATA
GCAACTATTGAGCAGAGTGCACCATCTCAAAGTGACCAGGAGCAACTATTCTCTAATGTA
CAGTACTTTGCCCACTACTGTCGGAAGTATGCACCATTGTACGCCGCTGAAGCAAAGAGA
GTGTTCTCACTTGAAAAGAAGATGAGCAATTACATACAGTTCAAGTCCAAATGCCGTATT
GAACCTGTCTGTCTCTTGCTCCATGGCAGCCCAGGCGCTGGGAAGTCTGTGGCAACGAAC
TTGATTGGGCGCTCGCTCGCTGAGAAACTCAACAGCTCGGTGTACTCACTACCACCAGAT
CCAGACCATTTCGATGGTTACAAACAGCAAGCTGTTGTCATCATGGACGACTTGTGCCAG
AACCCGGACGGTAAAGATGTGTCCTTGTTTTGTCAGATGGTCTCCAGCGTTGACTTCGTG
CCTCCCATGGCGGCGCTTGAGGAAAAAGGCATTCTATTCACCTCGCCGTTCGTTCTCGCG
TCCACCAATGCAGGGTCAGTTAACGCCCCCACGGTCTCCGACAGTAGAGCACTCGTAAGA
AGGTTCCACTTTGACATGAACATTGAGGTTGTTTCCATGTATAGCCAGAACGGTAAGATC
AACATGCCTATGGCAGTTAAAACATGTGATGAGGAGTGTTGCCCGGTCAACTTCAAAAAG
TGCTGCCCACTAGTGTGTGGCAAAGCTATACAATTCATAGACAGGAGGACCCAAGTTAGG
TATTCATTGGACATGCTGGTTACCGAAATGTTTAGGGAGTACAATCACAGACACAGCGTG
GGGGCCACCCTCGAGGCATTGTTCCAAGGACCACCAGTTTATAGAGAGATCAAAATCAGT
GTTGCCCCAGAAACTCCCCCACCACCAGCAGTTGCCGACTTACTGAAATCAGTAGACAGT
GAGGCCGTGAGGGAGTACTGCAAGGAGAAAGGGTGGCTTATACCGGAGGTCGATTCCACC
CTACAGATAGAAAAACATGTGAACAGAGCGTTCATATGTTTGCAAGCTCTAACCACATTT
GTCTCGGTTGCAGGCATAATATACATCATCTACAAACTGTTTGCAGGTTTCCAAGGCGCA
TACACAGGGATGCCTAATCAGAAACCCAGGGTGCCCACCCTGAGACAAGCCAAAGTGCAG
GGTCCAGCGTTTGAGTTCGCCGTGGCGATGATGAAAAGAAACGCCAGTACAGTGAAAACT
GAGTACGGTGAATTCACCATGCTTGGGATTTACGACAGGTGGGCGGTGTTGCCACGCCAT
GCCAAACCTGGCCCCACCATCTTGATGAACGACCAGGTAGTCGGAGTGTTGGACGCCAAG
GAACTAGTTGATAAAGATGGGACCAACCTGGAATTGACTCTCTTGAAGCTCAACCGCAAC
GAGAAGTTTAGAGACATCAGGGGATTCTTAGCACGAGAGGAGGTCGAAGTGAACGAAGCT
GTCCTAGCAATAAACACAAGTAAATTCCCGAATATGTACATACCCGTGGGCCGGGTAACC
GACTATGGGTTCTTAAATCTGGGTGGAACCCCCACGAAGAGAATGCTCATGTACAATTTC
CCAACTAGGGCAGGCCAGTGTGGGGGTGTCCTTATGTCAACAGGGAAAGTCCTGGGAATA
CATGTAGGAGGGAATGGACACCAAGGGTTTTCAGCGGCACTCCTCAGACACTACTTCAAC
GAGGAGCAGGGTGAGATAGAATTCATTGAGAGCTCGAAGGACGCAGGATTTCCCGTGATC
AACACCCCCAGCAAGACAAAATTGGAACCAAGTGTGTTTCACCACGTGTTCGAGGGCAAC
AAGGAACCAGCGGTTCTCAGAAATGGGGACCCACGACTCAAGGCCAACTTTGAGGAGGCA
ATCTTCTCCAAGTACATTGGCAATGTTAACACACATGTAGACGAGTACATGATGGAGGCT
GTAGATCATTATGCAGGACAACTAGCCACACTGGACATCAGCACGGAGCCCATGAAGCTA
GAAGATGCCGTGTATGGCACTGAGGGGCTCGAAGCACTAGACCTGACCACCAGTGCAGGT
TACCCTTATGTGGCCCTGGGTATCAAGAAAAGAGACATCCTATCCAAGAAGACCAGAGAC
CTTACCAAGCTAAAGGAATGCATGGACAAATATGGTCTAAACCTGCCAATGGTAACCTAT
GTCAAGGACGAGTTGAGATCTGCCGACAAAGTGGCCAAGGGAAAGTCCAGGCTCATCGAG
GCTTCTAGCCTCAACGACTCAGTAGCAATGAGGCAGACATTTGGAAACCTATATAAGACT
TTCCACCTCAACCCGGGCATCGTTACGGGTAGCGCCGTTGGGTGTGACCCAGATGTCTTT
TGGAGCAAGATTCCCGTCATGCTCGATGGACATCTCATAGCGTTTGACTATTCAGGCTAT
GACGCCAGCCTCAGCCCAGTGTGGTTTACGTGCTTGAAACTCCTCCTGGAGAAGCTAGGG
TACACAAACAAGGAAACGAACTACATAGACTACCTCTGTAATTCCCACCACCTGTACAGG
GACAAACACTACTTTGTGAGGGGCGGCATGCCATCAGGATGCTCAGGCACTAGCATATTT
AATTCCATGATTAACAACATCATAATCAGAACCCTCATGCTGAAGGTTTATAAAGGCATT
GATTTGGACCAATTCAGAATGATTGCATATGGGGATGATGTGATAGCTTCATACCCGTGG
CCCATCGATGCCTCACTGCTAGCTGAAGCAGGGAAGGATTATGGCTTGATCATGACCCCA
GCAGATAAAGGCGAGTGTTTCAATGAGGTAACCTGGACAAACGTGACCTTCCTGAAAAGG
TACTTCAGGGCAGATGAACAGTACCCATTTTTGGTCCATCCTGTCATGCCAATGAAGGAT
ATACACGAATCCATTAGGTGGACTAAAGATCCTAAGAACACACAGGATCACGTGCGCTCG
CTGTGTCTATTGGCCTGGCACAACGGGGAGCACGAATATGAGGAGTTTATTCGTAAGATC
AGAAGCGTCCGCGTAGGGCGCTGCTTGTCCCTCCCTGCGTTTTCAACGCTGCGCAGGAAG
TGGTTGGACTCCTTTTAA
Chromosome Location
Not Available
Locus
Not Available
External Identifiers
ResourceLink
UniProtKB IDP13900
UniProtKB Entry NamePOLG_SVDVU
GenBank Protein ID61168
GenBank Gene IDX54521
General References
  1. Seechurn P, Knowles NJ, McCauley JW: The complete nucleotide sequence of a pathogenic swine vesicular disease virus. Virus Res. 1990 Jul;16(3):255-74. [Article]
  2. Martino TA, Petric M, Weingartl H, Bergelson JM, Opavsky MA, Richardson CD, Modlin JF, Finberg RW, Kain KC, Willis N, Gauntt CJ, Liu PP: The coxsackie-adenovirus receptor (CAR) is used by reference strains and clinical isolates representing all six serotypes of coxsackievirus group B and by swine vesicular disease virus. Virology. 2000 May 25;271(1):99-108. [Article]
  3. Fry EE, Knowles NJ, Newman JW, Wilsden G, Rao Z, King AM, Stuart DI: Crystal structure of Swine vesicular disease virus and implications for host adaptation. J Virol. 2003 May;77(9):5475-86. [Article]

Drug Relations

Drug Relations
DrugBank IDNameDrug groupPharmacological action?ActionsDetails
DB08231Myristic acidexperimentalunknownDetails
DB03203SphingosineexperimentalunknownDetails