Peptide deformylase
Details
- Name
- Peptide deformylase
- Synonyms
- 3.5.1.88
- Polypeptide deformylase
- Gene Name
- def
- Organism
- Enterococcus faecalis (strain ATCC 700802 / V583)
- Amino acid sequence
>lcl|BSEQ0012704|Peptide deformylase MITMKDIIREGNPTLRAVAEEVPVPITEEDRQLGEDMLTFLKNSQDPVKAEELQLRGGVG LAAPQLDISKRIIAVHVPSNDPENETPSLSTVMYNPKILSHSVQDVCLGEGEGCLSVDRD VPGYVVRHNKITVSYFDMAGEKHKVRLKNYEAIVVQHEIDHINGIMFYDHINKENPFALK EGVLVIE
- Number of residues
- 187
- Molecular Weight
- 20911.76
- Theoretical pI
- 4.83
- GO Classification
- Functionsiron ion binding / peptide deformylase activityProcessestranslation
- General Function
- Peptide deformylase activity
- Specific Function
- Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
- Pfam Domain Function
- Pep_deformylase (PF01327)
- Transmembrane Regions
- Not Available
- Cellular Location
- Cytoplasmic
- Gene sequence
>lcl|BSEQ0012705|Peptide deformylase (def) ATGATTACAATGAAAGATATTATTCGTGAAGGGAATCCCACACTTCGTGCTGTGGCAGAA GAAGTGCCTGTCCCTATCACTGAGGAAGACCGACAATTAGGTGAGGACATGTTGACTTTC TTAAAAAATAGTCAAGATCCAGTCAAAGCCGAAGAATTACAATTACGTGGTGGCGTTGGT TTAGCTGCACCACAATTAGATATTTCTAAACGAATTATTGCTGTCCATGTTCCTAGTAAC GACCCAGAAAACGAAACGCCTTCATTAAGTACGGTGATGTACAACCCTAAAATTTTGAGC CATTCTGTGCAAGATGTATGTTTAGGTGAAGGGGAAGGCTGTTTATCTGTCGATCGGGAT GTACCTGGGTATGTCGTTCGCCATAACAAAATTACCGTCAGTTATTTTGACATGGCTGGC GAAAAACACAAAGTTCGTTTAAAAAACTACGAAGCGATTGTGGTTCAACATGAAATTGAT CATATTAATGGCATCATGTTCTACGATCATATTAACAAAGAAAATCCATTTGCTTTAAAA GAGGGCGTTTTAGTCATCGAATAA
- Chromosome Location
- Not Available
- Locus
- Not Available
- External Identifiers
Resource Link UniProtKB ID Q82ZJ0 UniProtKB Entry Name DEF_ENTFA GenBank Protein ID 29342120 GenBank Gene ID AE016830 - General References
- Paulsen IT, Banerjei L, Myers GS, Nelson KE, Seshadri R, Read TD, Fouts DE, Eisen JA, Gill SR, Heidelberg JF, Tettelin H, Dodson RJ, Umayam L, Brinkac L, Beanan M, Daugherty S, DeBoy RT, Durkin S, Kolonay J, Madupu R, Nelson W, Vamathevan J, Tran B, Upton J, Hansen T, Shetty J, Khouri H, Utterback T, Radune D, Ketchum KA, Dougherty BA, Fraser CM: Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis. Science. 2003 Mar 28;299(5615):2071-4. [Article]