Purification, crystallization and initial crystallographic analysis of RNA polymerase holoenzyme from Thermus thermophilus.

Article Details

Citation

Vassylyeva MN, Lee J, Sekine SI, Laptenko O, Kuramitsu S, Shibata T, Inoue Y, Borukhov S, Vassylyev DG, Yokoyama S

Purification, crystallization and initial crystallographic analysis of RNA polymerase holoenzyme from Thermus thermophilus.

Acta Crystallogr D Biol Crystallogr. 2002 Sep;58(Pt 9):1497-500. Epub 2002 Aug 23.

PubMed ID
12198314 [ View in PubMed
]
Abstract

RNA polymerase holoenzyme from Thermus thermophilus, consisting of six protein subunits (alpha(2), beta, beta', omega and sigma(70)) and having a total molecular mass of about 450 kDa, was purified and crystallized by the hanging-drop vapour-diffusion technique under mild near-physiological conditions. The crystals diffract beyond 3 A resolution. Careful analysis of diffraction data revealed that the crystals belong to space group P3(2), with unit-cell parameters a = b = 236.35, c = 249.04 A, and have perfect twinning along the threefold axis. A complete data set at 3 A resolution was collected and an unambiguous molecular-replacement solution was found using the structure of T. aquaticus RNA polymerase core enzyme as a search model. The refinement of structure and model building of the sigma(70) subunit is now in progress.

DrugBank Data that Cites this Article

Polypeptides
NameUniProt ID
DNA-directed RNA polymerase subunit betaQ8RQE9Details
DNA-directed RNA polymerase subunit beta'Q8RQE8Details
DNA-directed RNA polymerase subunit omegaQ8RQE7Details