D-ribose pyranase
Details
- Name
- D-ribose pyranase
- Kind
- protein
- Synonyms
- 5.4.99.62
- Gene Name
- rbsD
- UniProtKB Entry
- P36946Swiss-Prot
- Organism
- Bacillus subtilis (strain 168)
- NCBI Taxonomy ID
- 224308
- Amino acid sequence
>lcl|BSEQ0019201|D-ribose pyranase MKKHGILNSHLAKILADLGHTDKIVIADAGLPVPDGVLKIDLSLKPGLPAFQDTAAVLAE EMAVEKVIAAAEIKASNQENAKFLENLFSEQEIEYLSHEEFKLLTKDAKAVIRTGEFTPY ANCILQAGVLF
- Number of residues
- 131
- Molecular Weight
- 14227.32
- Theoretical pI
- 4.95
- GO Classification
- Functionsintramolecular lyase activity / monosaccharide bindingProcessesD-ribose catabolic processComponentscytoplasm
- General Function
- Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
- Specific Function
- D-ribose pyranase activity
- Pfam Domain Function
- RbsD_FucU (PF05025)
- Signal Regions
- Not Available
- Transmembrane Regions
- Not Available
- Cellular Location
- Cytoplasm
- Gene sequence
>lcl|BSEQ0019202|D-ribose pyranase (rbsD) ATGAAAAAACACGGTATACTGAACAGCCATCTTGCCAAGATTTTAGCCGACCTTGGCCAC ACTGATAAAATTGTCATCGCGGATGCCGGACTGCCGGTTCCTGACGGCGTTTTGAAAATT GATCTTTCACTGAAGCCGGGCCTTCCGGCTTTCCAAGATACAGCGGCAGTACTGGCTGAG GAAATGGCGGTCGAAAAAGTCATTGCTGCAGCTGAAATAAAAGCATCCAATCAGGAGAAT GCGAAATTTCTAGAAAATCTTTTCTCTGAACAAGAGATTGAATACCTTTCTCACGAGGAG TTTAAGCTGCTGACAAAAGATGCAAAGGCAGTCATAAGAACAGGAGAATTCACACCATAT GCCAACTGCATCCTGCAGGCAGGTGTACTTTTCTAG
- Chromosome Location
- Not Available
- Locus
- Not Available
- External Identifiers
Resource Link UniProtKB ID P36946 UniProtKB Entry Name RBSD_BACSU GenBank Protein ID 397496 GenBank Gene ID Z25798 PDB ID(s) 1OGC, 1OGD, 1OGE, 1OGF KEGG ID bsu:BSU35930 NCBI Gene ID 936846 - General References
- Woodson K, Devine KM: Analysis of a ribose transport operon from Bacillus subtilis. Microbiology. 1994 Aug;140 ( Pt 8):1829-38. [Article]
- Presecan E, Moszer I, Boursier L, Cruz Ramos HC, de la Fuente V, Hullo MF, Lelong C, Schleich S, Sekowska A, Song BH, Villani G, Kunst F, Danchin A, Glaser P: The Bacillus subtilis genome from gerBC (311 degrees) to licR (334 degrees). Microbiology. 1997 Oct;143 ( Pt 10):3313-28. [Article]
- Kunst F, Ogasawara N, Moszer I, Albertini AM, Alloni G, Azevedo V, Bertero MG, Bessieres P, Bolotin A, Borchert S, Borriss R, Boursier L, Brans A, Braun M, Brignell SC, Bron S, Brouillet S, Bruschi CV, Caldwell B, Capuano V, Carter NM, Choi SK, Cordani JJ, Connerton IF, Cummings NJ, Daniel RA, Denziot F, Devine KM, Dusterhoft A, Ehrlich SD, Emmerson PT, Entian KD, Errington J, Fabret C, Ferrari E, Foulger D, Fritz C, Fujita M, Fujita Y, Fuma S, Galizzi A, Galleron N, Ghim SY, Glaser P, Goffeau A, Golightly EJ, Grandi G, Guiseppi G, Guy BJ, Haga K, Haiech J, Harwood CR, Henaut A, Hilbert H, Holsappel S, Hosono S, Hullo MF, Itaya M, Jones L, Joris B, Karamata D, Kasahara Y, Klaerr-Blanchard M, Klein C, Kobayashi Y, Koetter P, Koningstein G, Krogh S, Kumano M, Kurita K, Lapidus A, Lardinois S, Lauber J, Lazarevic V, Lee SM, Levine A, Liu H, Masuda S, Mauel C, Medigue C, Medina N, Mellado RP, Mizuno M, Moestl D, Nakai S, Noback M, Noone D, O'Reilly M, Ogawa K, Ogiwara A, Oudega B, Park SH, Parro V, Pohl TM, Portelle D, Porwollik S, Prescott AM, Presecan E, Pujic P, Purnelle B, Rapoport G, Rey M, Reynolds S, Rieger M, Rivolta C, Rocha E, Roche B, Rose M, Sadaie Y, Sato T, Scanlan E, Schleich S, Schroeter R, Scoffone F, Sekiguchi J, Sekowska A, Seror SJ, Serror P, Shin BS, Soldo B, Sorokin A, Tacconi E, Takagi T, Takahashi H, Takemaru K, Takeuchi M, Tamakoshi A, Tanaka T, Terpstra P, Togoni A, Tosato V, Uchiyama S, Vandebol M, Vannier F, Vassarotti A, Viari A, Wambutt R, Wedler H, Weitzenegger T, Winters P, Wipat A, Yamamoto H, Yamane K, Yasumoto K, Yata K, Yoshida K, Yoshikawa HF, Zumstein E, Yoshikawa H, Danchin A: The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature. 1997 Nov 20;390(6657):249-56. [Article]
- Kim MS, Shin J, Lee W, Lee HS, Oh BH: Crystal structures of RbsD leading to the identification of cytoplasmic sugar-binding proteins with a novel folding architecture. J Biol Chem. 2003 Jul 25;278(30):28173-80. Epub 2003 May 8. [Article]
Associated Data
- Drug Relations
Drug Drug group Pharmacological action? Type Actions Details beta-D-Ribopyranose experimental unknown target Details beta-D-Ribose-5-phosphate experimental unknown target Details