Lysine Nz-Carboxylic Acid

Identification

Generic Name: Lysine Nz-Carboxylic Acid
DrugBank Accession Number: DB03801
Background: Not Available
Type: Small Molecule
Groups: Experimental
Structure: 3D
MOL SDF 3D-SDF PDB SMILES InChI

Similar Structures
Structure for Lysine Nz-Carboxylic Acid (DB03801)
Synonyms: Not Available

Pharmacology

Indication

Not Available

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Contraindications & Blackbox Warnings

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Pharmacodynamics

Not Available

Mechanism of action

Target	Actions	Organism
UBeta-lactamase OXA-10	Not Available	Pseudomonas aeruginosa
UUDP-N-acetylmuramoylalanine--D-glutamate ligase	Not Available	Escherichia coli (strain K12)
UAlanine racemase	Not Available	Geobacillus stearothermophilus
UUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	Not Available	Escherichia coli (strain K12)
UParathion hydrolase	Not Available	Flavobacterium sp. (strain ATCC 27551)
UFolylpolyglutamate synthase	Not Available	Lactobacillus casei
UDihydroorotase	Not Available	Escherichia coli (strain K12)
UCyclin-dependent kinase 2	Not Available	Humans
UD-hydantoinase	Not Available	Ralstonia pickettii
UBeta-lactamase OXA-1	Not Available	Escherichia coli
UL-hydantoinase	Not Available	Arthrobacter aurescens
UD-hydantoinase	Not Available	Geobacillus stearothermophilus
UMethylmalonyl-CoA carboxyltransferase 5S subunit	Not Available	Propionibacterium freudenreichii subsp. shermanii
UIsoaspartyl dipeptidase	Not Available	Escherichia coli (strain K12)
UBeta-lactamase OXA-2	Not Available	Salmonella typhimurium
UAlanine racemase, catabolic	Not Available	Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
UEndonuclease III	Not Available	Helicobacter pylori (strain ATCC 700392 / 26695)
UHydrolase	Not Available	Thermus sp.
UAlpha-L-fucosidase, putative	Not Available	Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)

Absorption

Not Available

Volume of distribution

Not Available

Protein binding

Not Available

Metabolism

Not Available

Route of elimination

Not Available

Half-life

Not Available

Clearance

Not Available

Adverse Effects

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Toxicity

Not Available

Pathways

Not Available

Pharmacogenomic Effects/ADRs

Not Available

Interactions

Drug Interactions: This information should not be interpreted without the help of a healthcare provider. If you believe you are experiencing an interaction, contact a healthcare provider immediately. The absence of an interaction does not necessarily mean no interactions exist.
Not Available
Food Interactions: Not Available

Chemical Identifiers

UNII: J9ET8AZ2P7
CAS number: Not Available
InChI Key: PWIKLEYMFKCERQ-YFKPBYRVSA-N
InChI: InChI=1S/C7H14N2O4/c8-5(6(10)11)3-1-2-4-9-7(12)13/h5,9H,1-4,8H2,(H,10,11)(H,12,13)/t5-/m0/s1
IUPAC Name: (2S)-2-amino-6-(carboxyamino)hexanoic acid
SMILES: N[C@@H](CCCCNC(O)=O)C(O)=O

References

General References

Not Available

External Links

PubChem Compound: 17754054
PubChem Substance: 46507407
ChemSpider: 16744071
ChEBI: 43575
ZINC: ZINC000006753301
PDBe Ligand: KCX

PDB Entries

1aa1 / 1bwv / 1e4d / 1e8c / 1e9y / 1e9z / 1ef2 / 1ejr / 1ejs / 1ejt …

show 674 more

Clinical Trials

Clinical Trials

Phase	Status	Purpose	Conditions	Count

Pharmacoeconomics

Manufacturers: Not Available
Packagers: Not Available
Dosage Forms: Not Available
Prices: Not Available
Patents: Not Available

Properties

State

Solid

Experimental Properties

Not Available

Predicted Properties

Property	Value	Source
Water Solubility	13.5 mg/mL	ALOGPS
logP	-3.3	ALOGPS
logP	-2.8	Chemaxon
logS	-1.2	ALOGPS
pKa (Strongest Acidic)	2.14	Chemaxon
pKa (Strongest Basic)	9.53	Chemaxon
Physiological Charge	-1	Chemaxon
Hydrogen Acceptor Count	5	Chemaxon
Hydrogen Donor Count	4	Chemaxon
Polar Surface Area	112.65 Å²	Chemaxon
Rotatable Bond Count	6	Chemaxon
Refractivity	44.11 m³·mol^-1	Chemaxon
Polarizability	19.15 Å³	Chemaxon
Number of Rings	0	Chemaxon
Bioavailability	1	Chemaxon
Rule of Five	Yes	Chemaxon
Ghose Filter	No	Chemaxon
Veber's Rule	No	Chemaxon
MDDR-like Rule	No	Chemaxon

Predicted ADMET Features

Property	Value	Probability
Human Intestinal Absorption	+	0.5806
Blood Brain Barrier	+	0.8497
Caco-2 permeable	-	0.82
P-glycoprotein substrate	Non-substrate	0.5691
P-glycoprotein inhibitor I	Non-inhibitor	0.9727
P-glycoprotein inhibitor II	Non-inhibitor	0.9341
Renal organic cation transporter	Non-inhibitor	0.9469
CYP450 2C9 substrate	Non-substrate	0.7954
CYP450 2D6 substrate	Non-substrate	0.8046
CYP450 3A4 substrate	Non-substrate	0.7711
CYP450 1A2 substrate	Non-inhibitor	0.8951
CYP450 2C9 inhibitor	Non-inhibitor	0.946
CYP450 2D6 inhibitor	Non-inhibitor	0.9597
CYP450 2C19 inhibitor	Non-inhibitor	0.9243
CYP450 3A4 inhibitor	Non-inhibitor	0.8912
CYP450 inhibitory promiscuity	Low CYP Inhibitory Promiscuity	0.9936
Ames test	Non AMES toxic	0.6521
Carcinogenicity	Non-carcinogens	0.9254
Biodegradation	Ready biodegradable	0.6107
Rat acute toxicity	1.5244 LD50, mol/kg	Not applicable
hERG inhibition (predictor I)	Weak inhibitor	0.9812
hERG inhibition (predictor II)	Non-inhibitor	0.9653

ADMET data is predicted using admetSAR, a free tool for evaluating chemical ADMET properties. (23092397)

Spectra

Mass Spec (NIST)

Not Available

Spectra

Spectrum	Spectrum Type	Splash Key
Predicted GC-MS Spectrum - GC-MS	Predicted GC-MS	Not Available
Predicted MS/MS Spectrum - 10V, Positive (Annotated)	Predicted LC-MS/MS	Not Available
Predicted MS/MS Spectrum - 20V, Positive (Annotated)	Predicted LC-MS/MS	Not Available
Predicted MS/MS Spectrum - 40V, Positive (Annotated)	Predicted LC-MS/MS	Not Available
Predicted MS/MS Spectrum - 10V, Negative (Annotated)	Predicted LC-MS/MS	Not Available
Predicted MS/MS Spectrum - 20V, Negative (Annotated)	Predicted LC-MS/MS	Not Available
Predicted MS/MS Spectrum - 40V, Negative (Annotated)	Predicted LC-MS/MS	Not Available

Targets

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insights and accelerate drug research.

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Use our structured and evidence-based datasets to unlock new insights and accelerate drug research.

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Details1. Beta-lactamase OXA-10

Kind: Protein
Organism: Pseudomonas aeruginosa
Pharmacological action: Unknown

General Function: Penicillin binding
Specific Function: Hydrolyzes both carbenicillin and oxacillin.
Gene Name: bla
Uniprot ID: P14489
Uniprot Name: Beta-lactamase OXA-10
Molecular Weight: 29506.575 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details2. UDP-N-acetylmuramoylalanine--D-glutamate ligase

Kind: Protein
Organism: Escherichia coli (strain K12)
Pharmacological action: Unknown

General Function: Udp-n-acetylmuramoylalanine-d-glutamate ligase activity
Specific Function: Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA).
Gene Name: murD
Uniprot ID: P14900
Uniprot Name: UDP-N-acetylmuramoylalanine--D-glutamate ligase
Molecular Weight: 46973.185 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details3. Alanine racemase

Kind: Protein
Organism: Geobacillus stearothermophilus
Pharmacological action: Unknown

General Function: Pyridoxal phosphate binding
Specific Function: Catalyzes the interconversion of L-alanine and D-alanine. Also weakly active on serine.
Gene Name: alr
Uniprot ID: P10724
Uniprot Name: Alanine racemase
Molecular Weight: 43592.715 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details4. UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase

Kind: Protein
Organism: Escherichia coli (strain K12)
Pharmacological action: Unknown

General Function: Udp-n-acetylmuramoylalanyl-d-glutamate-2,6-diaminopimelate ligase activity
Specific Function: Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Is also abl...
Gene Name: murE
Uniprot ID: P22188
Uniprot Name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
Molecular Weight: 53343.13 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details5. Parathion hydrolase

Kind: Protein
Organism: Flavobacterium sp. (strain ATCC 27551)
Pharmacological action: Unknown

General Function: Zinc ion binding
Specific Function: Has an unusual substrate specificity for synthetic organophosphate triesters and phosphorofluoridates. All of the phosphate triesters found to be substrates are synthetic compounds. The identity of...
Gene Name: opd
Uniprot ID: P0A433
Uniprot Name: Parathion hydrolase
Molecular Weight: 39003.24 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details6. Folylpolyglutamate synthase

Kind: Protein
Organism: Lactobacillus casei
Pharmacological action: Unknown

General Function: Tetrahydrofolylpolyglutamate synthase activity
Specific Function: Conversion of folates to polyglutamate derivatives. It prefers 5,10-methylenetetrahydrofolate, rather than 10-formyltetrahydrofolate as folate substrate.
Gene Name: fgs
Uniprot ID: P15925
Uniprot Name: Folylpolyglutamate synthase
Molecular Weight: 46588.815 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details7. Dihydroorotase

Kind: Protein
Organism: Escherichia coli (strain K12)
Pharmacological action: Unknown

General Function: Zinc ion binding
Specific Function: Not Available
Gene Name: pyrC
Uniprot ID: P05020
Uniprot Name: Dihydroorotase
Molecular Weight: 38827.045 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details8. Cyclin-dependent kinase 2

Kind: Protein
Organism: Humans
Pharmacological action: Unknown

General Function: Metal ion binding
Specific Function: Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, N...
Gene Name: CDK2
Uniprot ID: P24941
Uniprot Name: Cyclin-dependent kinase 2
Molecular Weight: 33929.215 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details9. D-hydantoinase

Kind: Protein
Organism: Ralstonia pickettii
Pharmacological action: Unknown

General Function: Metal ion binding
Specific Function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin derivatives.
Gene Name: hyuA
Uniprot ID: Q8VTT5
Uniprot Name: D-hydantoinase
Molecular Weight: 49931.52 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details10. Beta-lactamase OXA-1

Kind: Protein
Organism: Escherichia coli
Pharmacological action: Unknown

General Function: Penicillin binding
Specific Function: This is an oxacillin-hydrolyzing beta-lactamase.
Gene Name: bla
Uniprot ID: P13661
Uniprot Name: Beta-lactamase OXA-1
Molecular Weight: 30879.895 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details11. L-hydantoinase

Kind: Protein
Organism: Arthrobacter aurescens
Pharmacological action: Unknown

General Function: Zinc ion binding
Specific Function: Rather more predominant for the cleavage of aryl- than for alkyl-hydantoin derivatives. The stereoselectivity of this enzyme depends on the substrate used for bioconversion: strictly L-selective fo...
Gene Name: lhyD
Uniprot ID: P81006
Uniprot Name: L-hydantoinase
Molecular Weight: 49596.275 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details12. D-hydantoinase

Kind: Protein
Organism: Geobacillus stearothermophilus
Pharmacological action: Unknown

General Function: Metal ion binding
Specific Function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin. Has no activity on dihydropyrimidines.
Gene Name: Not Available
Uniprot ID: Q45515
Uniprot Name: D-hydantoinase
Molecular Weight: 51724.68 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details13. Methylmalonyl-CoA carboxyltransferase 5S subunit

Kind: Protein
Organism: Propionibacterium freudenreichii subsp. shermanii
Pharmacological action: Unknown

General Function: Methylmalonyl-coa carboxytransferase activity
Specific Function: The 5S subunit specifically catalyzes the transfer of the carboxyl group from biotin of the 1.3S subunit to pyruvate to form oxaloacetate and 1.3S biotin.
Gene Name: Not Available
Uniprot ID: Q70AC7
Uniprot Name: Methylmalonyl-CoA carboxyltransferase 5S subunit
Molecular Weight: 55649.06 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details14. Isoaspartyl dipeptidase

Kind: Protein
Organism: Escherichia coli (strain K12)
Pharmacological action: Unknown

General Function: Zinc ion binding
Specific Function: Catalyzes the hydrolytic cleavage of a subset of L-isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. The best substrate for the enzyme ...
Gene Name: iadA
Uniprot ID: P39377
Uniprot Name: Isoaspartyl dipeptidase
Molecular Weight: 41083.515 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details15. Beta-lactamase OXA-2

Kind: Protein
Organism: Salmonella typhimurium
Pharmacological action: Unknown

General Function: Penicillin binding
Specific Function: This is an oxacillin-hydrolyzing beta-lactamase.
Gene Name: bla
Uniprot ID: P0A1V8
Uniprot Name: Beta-lactamase OXA-2
Molecular Weight: 31685.78 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details16. Alanine racemase, catabolic

Kind: Protein
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Pharmacological action: Unknown

General Function: Pyridoxal phosphate binding
Specific Function: Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA.
Gene Name: dadX
Uniprot ID: Q9HTQ2
Uniprot Name: Alanine racemase, catabolic
Molecular Weight: 38914.32 Da

References

Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]

Details17. Endonuclease III

Kind: Protein
Organism: Helicobacter pylori (strain ATCC 700392 / 26695)
Pharmacological action: Unknown

General Function: Endonuclease activity
Specific Function: Not Available
Gene Name: Not Available
Uniprot ID: O25323
Uniprot Name: Endonuclease III
Molecular Weight: 25286.105 Da

Details18. Hydrolase

Kind: Protein
Organism: Thermus sp.
Pharmacological action: Unknown

General Function: Metal ion binding
Specific Function: Not Available
Gene Name: Not Available
Uniprot ID: Q7SIE9
Uniprot Name: Hydrolase
Molecular Weight: 50675.185 Da

Details19. Alpha-L-fucosidase, putative

Kind: Protein
Organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Pharmacological action: Unknown

General Function: Alpha-l-fucosidase activity
Specific Function: Not Available
Gene Name: Not Available
Uniprot ID: Q9WYE2
Uniprot Name: Alpha-L-fucosidase, putative
Molecular Weight: 52204.95 Da

Drug created at June 13, 2005 13:24 / Updated at June 12, 2020 16:52

Lysine Nz-Carboxylic Acid

Identification

Structure for Lysine Nz-Carboxylic Acid (DB03801)

Pharmacology

Interactions

Categories

Chemical Identifiers

References

Clinical Trials

Pharmacoeconomics

Properties

Spectra

Targets

References

References

References

References

References

References

References

References

References

References

References

References

References

References

References

References