Brivudine monophosphate
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Overview
- DrugBank ID
- DB04438
- Type
- Small Molecule
- Clinical Trials
- Phase 0
- 0
- Phase 1
- 0
- Phase 2
- 0
- Phase 3
- 0
- Phase 4
- 0
Identification
- Generic Name
- Brivudine monophosphate
- DrugBank Accession Number
- DB04438
- Background
Not Available
- Type
- Small Molecule
- Groups
- Experimental
- Structure
- Weight
- Average: 413.115
Monoisotopic: 411.967114593 - Chemical Formula
- C11H14BrN2O8P
- Synonyms
- Bvdu 5'-monophosphate
- BVDU-MP
Pharmacology
- Indication
Not Available
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- Pharmacodynamics
Not Available
- Mechanism of action
Target Actions Organism UThymidine kinase Not Available HHV-3 - Absorption
Not Available
- Volume of distribution
Not Available
- Protein binding
Not Available
- Metabolism
- Not Available
- Route of elimination
Not Available
- Half-life
Not Available
- Clearance
Not Available
- Adverse Effects
- Improve decision support & research outcomesWith structured adverse effects data, including: blackbox warnings, adverse reactions, warning & precautions, & incidence rates. View sample adverse effects data in our new Data Library!Improve decision support & research outcomes with our structured adverse effects data.
- Toxicity
Not Available
- Pathways
- Not Available
- Pharmacogenomic Effects/ADRs
- Not Available
Interactions
- Drug Interactions
- This information should not be interpreted without the help of a healthcare provider. If you believe you are experiencing an interaction, contact a healthcare provider immediately. The absence of an interaction does not necessarily mean no interactions exist.Not Available
- Food Interactions
- Not Available
Categories
- Drug Categories
- Not Available
- Chemical TaxonomyProvided by Classyfire
- Description
- This compound belongs to the class of organic compounds known as pyrimidine 2'-deoxyribonucleoside monophosphates. These are pyrimidine nucleotides with a monophosphate group linked to the ribose moiety lacking a hydroxyl group at position 2.
- Kingdom
- Organic compounds
- Super Class
- Nucleosides, nucleotides, and analogues
- Class
- Pyrimidine nucleotides
- Sub Class
- Pyrimidine deoxyribonucleotides
- Direct Parent
- Pyrimidine 2'-deoxyribonucleoside monophosphates
- Alternative Parents
- Monoalkyl phosphates / Pyrimidones / Hydropyrimidines / Vinylogous amides / Heteroaromatic compounds / Tetrahydrofurans / Ureas / Lactams / Secondary alcohols / Vinyl bromides show 8 more
- Substituents
- Alcohol / Alkyl phosphate / Aromatic heteromonocyclic compound / Azacycle / Bromoalkene / Haloalkene / Heteroaromatic compound / Hydrocarbon derivative / Hydropyrimidine / Lactam show 22 more
- Molecular Framework
- Aromatic heteromonocyclic compounds
- External Descriptors
- Not Available
- Affected organisms
- Not Available
Chemical Identifiers
- UNII
- O7N0Y11U8K
- CAS number
- 80860-82-8
- InChI Key
- LKWCVKAHHUJPQO-PIXDULNESA-N
- InChI
- InChI=1S/C11H14BrN2O8P/c12-2-1-6-4-14(11(17)13-10(6)16)9-3-7(15)8(22-9)5-21-23(18,19)20/h1-2,4,7-9,15H,3,5H2,(H,13,16,17)(H2,18,19,20)/b2-1+/t7-,8+,9+/m0/s1
- IUPAC Name
- {[(2R,3S,5R)-5-{5-[(1E)-2-bromoethenyl]-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl}-3-hydroxyoxolan-2-yl]methoxy}phosphonic acid
- SMILES
- O[C@H]1C[C@@H](O[C@@H]1COP(O)(O)=O)N1C=C(\C=C\Br)C(=O)NC1=O
References
- General References
- Not Available
- External Links
- PubChem Compound
- 6505368
- PubChem Substance
- 46507968
- ChemSpider
- 5005362
- ChEMBL
- CHEMBL1231519
- PDBe Ligand
- BVP
- PDB Entries
- 1osn / 2jaw / 2w0s / 4xsc
Clinical Trials
- Clinical Trials
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Pharmacoeconomics
- Manufacturers
- Not Available
- Packagers
- Not Available
- Dosage Forms
- Not Available
- Prices
- Not Available
- Patents
- Not Available
Properties
- State
- Solid
- Experimental Properties
- Not Available
- Predicted Properties
Property Value Source Water Solubility 3.97 mg/mL ALOGPS logP -0.76 ALOGPS logP -0.62 Chemaxon logS -2 ALOGPS pKa (Strongest Acidic) 1.23 Chemaxon pKa (Strongest Basic) -3.2 Chemaxon Physiological Charge -2 Chemaxon Hydrogen Acceptor Count 7 Chemaxon Hydrogen Donor Count 4 Chemaxon Polar Surface Area 145.63 Å2 Chemaxon Rotatable Bond Count 5 Chemaxon Refractivity 78.55 m3·mol-1 Chemaxon Polarizability 31.79 Å3 Chemaxon Number of Rings 2 Chemaxon Bioavailability 1 Chemaxon Rule of Five Yes Chemaxon Ghose Filter No Chemaxon Veber's Rule No Chemaxon MDDR-like Rule No Chemaxon - Predicted ADMET Features
Property Value Probability Human Intestinal Absorption + 0.65 Blood Brain Barrier + 0.8401 Caco-2 permeable - 0.7691 P-glycoprotein substrate Non-substrate 0.694 P-glycoprotein inhibitor I Non-inhibitor 0.7415 P-glycoprotein inhibitor II Non-inhibitor 0.8932 Renal organic cation transporter Non-inhibitor 0.9048 CYP450 2C9 substrate Non-substrate 0.6779 CYP450 2D6 substrate Non-substrate 0.8391 CYP450 3A4 substrate Substrate 0.5184 CYP450 1A2 substrate Non-inhibitor 0.8232 CYP450 2C9 inhibitor Non-inhibitor 0.8376 CYP450 2D6 inhibitor Non-inhibitor 0.897 CYP450 2C19 inhibitor Non-inhibitor 0.8091 CYP450 3A4 inhibitor Non-inhibitor 0.7213 CYP450 inhibitory promiscuity Low CYP Inhibitory Promiscuity 0.8507 Ames test Non AMES toxic 0.617 Carcinogenicity Non-carcinogens 0.8035 Biodegradation Not ready biodegradable 0.8944 Rat acute toxicity 2.3548 LD50, mol/kg Not applicable hERG inhibition (predictor I) Weak inhibitor 0.9547 hERG inhibition (predictor II) Non-inhibitor 0.8103
Spectra
- Mass Spec (NIST)
- Not Available
- Spectra
Spectrum Spectrum Type Splash Key Predicted MS/MS Spectrum - 10V, Positive (Annotated) Predicted LC-MS/MS splash10-03di-1028900000-ed2ffbc3d3c8a0787993 Predicted MS/MS Spectrum - 10V, Negative (Annotated) Predicted LC-MS/MS splash10-03fr-8002900000-03299f15a287bfa8ccc9 Predicted MS/MS Spectrum - 20V, Negative (Annotated) Predicted LC-MS/MS splash10-004i-9000000000-b282885faf6ef2f59b99 Predicted MS/MS Spectrum - 20V, Positive (Annotated) Predicted LC-MS/MS splash10-014i-1194000000-3cd831ca6178b89af40a Predicted MS/MS Spectrum - 40V, Negative (Annotated) Predicted LC-MS/MS splash10-004i-9000000000-581795072ebdd3213c1d Predicted MS/MS Spectrum - 40V, Positive (Annotated) Predicted LC-MS/MS splash10-00xr-1390000000-7aeeb962be273c512fe3 Predicted 1H NMR Spectrum 1D NMR Not Applicable Predicted 13C NMR Spectrum 1D NMR Not Applicable - Chromatographic Properties
Collision Cross Sections (CCS)
Adduct CCS Value (Å2) Source type Source [M-H]- 179.3916 predictedDeepCCS 1.0 (2019) [M+H]+ 181.287 predictedDeepCCS 1.0 (2019) [M+Na]+ 187.69392 predictedDeepCCS 1.0 (2019)
Targets
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1. DetailsThymidine kinase
- Kind
- Protein
- Organism
- HHV-3
- Pharmacological action
- Unknown
- General Function
- Catalyzes the transfer of the gamma-phospho group of ATP to thymidine to generate dTMP in the salvage pathway of pyrimidine synthesis. The dTMP serves as a substrate for DNA polymerase during viral DNA replication. Allows the virus to be reactivated and to grow in non-proliferative cells lacking a high concentration of phosphorylated nucleic acid precursors.
- Specific Function
- ATP binding
- Gene Name
- Not Available
- Uniprot ID
- P0C0E6
- Uniprot Name
- Thymidine kinase
- Molecular Weight
- 37842.57 Da
References
- Bird LE, Ren J, Wright A, Leslie KD, Degreve B, Balzarini J, Stammers DK: Crystal structure of varicella zoster virus thymidine kinase. J Biol Chem. 2003 Jul 4;278(27):24680-7. Epub 2003 Apr 9. [Article]
Drug created at June 13, 2005 13:24 / Updated at June 12, 2020 16:52