Photosystem II protein D1 1

Details

Name
Photosystem II protein D1 1
Synonyms
  • 1.10.3.9
  • Photosystem II Q(B) protein 1
  • psbA-1
  • PSII D1 protein 1
Gene Name
psbA1
UniProtKB Entry
P0A444Swiss-Prot
Organism
Thermosynechococcus elongatus (strain BP-1)
NCBI Taxonomy ID
197221
Amino acid sequence
>lcl|BSEQ0017076|Photosystem II protein D1 1
MTTTLQRRESANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVDI
DGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFL
LGASCYMGRQWELSYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTF
NFMIVFQAEHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFG
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGVWFTALGISTMAFNLNGF
NFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLASAESAPVAMIAPSING
Number of residues
360
Molecular Weight
39736.205
Theoretical pI
5.92
GO Classification
Functions
chlorophyll binding / electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity / metal ion binding / oxidoreductase activity
Processes
photosynthetic electron transport in photosystem II / protein-chromophore linkage / response to herbicide
Components
integral component of membrane / photosystem II / thylakoid membrane
General Function
Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
Specific Function
chlorophyll binding
Pfam Domain Function
Signal Regions
Not Available
Transmembrane Regions
32-49 115-130 144-156 197-214 274-288
Cellular Location
Cellular thylakoid membrane
Gene sequence
>lcl|BSEQ0017077|Photosystem II protein D1 1 (psbA1)
ATGACCACAACTCTCCAACGTCGCGAAAGCGCGAATTTGTGGGAGCGGTTTTGTAACTGG
GTGACGAGCACCGATAACCGCCTTTATGTGGGCTGGTTTGGGGTGATCATGATCCCCACC
CTATTAGCCGCAACCATCTGCTTTGTGATTGCCTTCATCGCTGCTCCCCCTGTGGACATC
GATGGCATCCGTGAGCCTGTTTCTGGCTCTTTGCTCTATGGCAACAACATCATCACGGGT
GCAGTTGTCCCCTCTAGCAACGCCATTGGCTTGCACTTCTACCCCATTTGGGAAGCTGCT
TCCCTCGATGAGTGGCTCTACAACGGTGGCCCCTACCAACTGATCATCTTCCACTTCCTG
TTGGGTGCCTCCTGCTACATGGGTCGCCAGTGGGAACTCAGCTACCGCCTCGGTATGCGG
CCTTGGATCTGCGTGGCCTACTCTGCCCCCCTGGCTTCTGCCTTTGCAGTCTTCTTGATC
TACCCCATTGGTCAAGGCAGCTTCTCTGACGGGATGCCCCTCGGTATCTCTGGTACCTTC
AACTTTATGATTGTGTTCCAAGCGGAGCACAACATTCTCATGCACCCCTTCCACCAACTG
GGTGTAGCCGGTGTCTTTGGTGGGGCGCTGTTCTGCGCCATGCACGGTTCTCTGGTGACC
TCCAGCTTGATCCGTGAAACCACCGAAACCGAATCCGCCAACTACGGTTACAAATTTGGT
CAAGAGGAAGAAACCTACAACATCGTGGCTGCCCACGGTTACTTTGGCCGGTTGATCTTC
CAATACGCCAGCTTCAACAACAGCCGCTCCCTGCACTTCTTCTTGGCCGCTTGGCCGGTG
GTGGGTGTGTGGTTTACCGCCTTGGGGATCAGCACCATGGCCTTTAACCTGAATGGCTTC
AACTTCAACCACTCGGTCATTGATGCCAAGGGCAACGTGATCAACACCTGGGCGGACATC
ATCAACCGTGCCAACTTGGGTATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCC
CTCGACTTGGCCAGCGCTGAGTCTGCTCCTGTGGCCATGATTGCTCCCAGCATCAACGGC
TAA
Chromosome Location
Not Available
Locus
Not Available
External Identifiers
ResourceLink
UniProtKB IDP0A444
UniProtKB Entry NamePSBA1_THEEB
GenBank Gene IDBA000039
PDB ID(s)1S5L, 1W5C, 2AXT, 3KZI, 4FBY, 4IXQ, 4IXR, 4PBU, 4PJ0, 4RVY, 4TNH, 4TNI, 4TNJ, 4TNK, 4V62, 4V82
KEGG IDtel:tlr1843
NCBI Gene ID1010908
General References
  1. Nakamura Y, Kaneko T, Sato S, Ikeuchi M, Katoh H, Sasamoto S, Watanabe A, Iriguchi M, Kawashima K, Kimura T, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Nakazaki N, Shimpo S, Sugimoto M, Takeuchi C, Yamada M, Tabata S: Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1. DNA Res. 2002 Aug 31;9(4):123-30. [Article]
  2. Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P: Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution. Nature. 2001 Feb 8;409(6821):739-43. [Article]
  3. Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S: Architecture of the photosynthetic oxygen-evolving center. Science. 2004 Mar 19;303(5665):1831-8. Epub 2004 Feb 5. [Article]
  4. Loll B, Kern J, Saenger W, Zouni A, Biesiadka J: Towards complete cofactor arrangement in the 3.0 A resolution structure of photosystem II. Nature. 2005 Dec 15;438(7070):1040-4. [Article]
  5. Guskov A, Kern J, Gabdulkhakov A, Broser M, Zouni A, Saenger W: Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride. Nat Struct Mol Biol. 2009 Mar;16(3):334-42. doi: 10.1038/nsmb.1559. Epub 2009 Feb 15. [Article]
  6. Broser M, Gabdulkhakov A, Kern J, Guskov A, Muh F, Saenger W, Zouni A: Crystal structure of monomeric photosystem II from Thermosynechococcus elongatus at 3.6-a resolution. J Biol Chem. 2010 Aug 20;285(34):26255-62. doi: 10.1074/jbc.M110.127589. Epub 2010 Jun 17. [Article]
  7. Broser M, Glockner C, Gabdulkhakov A, Guskov A, Buchta J, Kern J, Muh F, Dau H, Saenger W, Zouni A: Structural basis of cyanobacterial photosystem II Inhibition by the herbicide terbutryn. J Biol Chem. 2011 May 6;286(18):15964-72. doi: 10.1074/jbc.M110.215970. Epub 2011 Mar 2. [Article]
  8. Kern J, Alonso-Mori R, Hellmich J, Tran R, Hattne J, Laksmono H, Glockner C, Echols N, Sierra RG, Sellberg J, Lassalle-Kaiser B, Gildea RJ, Glatzel P, Grosse-Kunstleve RW, Latimer MJ, McQueen TA, DiFiore D, Fry AR, Messerschmidt M, Miahnahri A, Schafer DW, Seibert MM, Sokaras D, Weng TC, Zwart PH, White WE, Adams PD, Bogan MJ, Boutet S, Williams GJ, Messinger J, Sauter NK, Zouni A, Bergmann U, Yano J, Yachandra VK: Room temperature femtosecond X-ray diffraction of photosystem II microcrystals. Proc Natl Acad Sci U S A. 2012 Jun 19;109(25):9721-6. doi: 10.1073/pnas.1204598109. Epub 2012 Jun 4. [Article]
  9. Kern J, Alonso-Mori R, Tran R, Hattne J, Gildea RJ, Echols N, Glockner C, Hellmich J, Laksmono H, Sierra RG, Lassalle-Kaiser B, Koroidov S, Lampe A, Han G, Gul S, Difiore D, Milathianaki D, Fry AR, Miahnahri A, Schafer DW, Messerschmidt M, Seibert MM, Koglin JE, Sokaras D, Weng TC, Sellberg J, Latimer MJ, Grosse-Kunstleve RW, Zwart PH, White WE, Glatzel P, Adams PD, Bogan MJ, Williams GJ, Boutet S, Messinger J, Zouni A, Sauter NK, Yachandra VK, Bergmann U, Yano J: Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature. Science. 2013 Apr 26;340(6131):491-5. doi: 10.1126/science.1234273. Epub 2013 Feb 14. [Article]
  10. Kupitz C, Basu S, Grotjohann I, Fromme R, Zatsepin NA, Rendek KN, Hunter MS, Shoeman RL, White TA, Wang D, James D, Yang JH, Cobb DE, Reeder B, Sierra RG, Liu H, Barty A, Aquila AL, Deponte D, Kirian RA, Bari S, Bergkamp JJ, Beyerlein KR, Bogan MJ, Caleman C, Chao TC, Conrad CE, Davis KM, Fleckenstein H, Galli L, Hau-Riege SP, Kassemeyer S, Laksmono H, Liang M, Lomb L, Marchesini S, Martin AV, Messerschmidt M, Milathianaki D, Nass K, Ros A, Roy-Chowdhury S, Schmidt K, Seibert M, Steinbrener J, Stellato F, Yan L, Yoon C, Moore TA, Moore AL, Pushkar Y, Williams GJ, Boutet S, Doak RB, Weierstall U, Frank M, Chapman HN, Spence JC, Fromme P: Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser. Nature. 2014 Sep 11;513(7517):261-5. doi: 10.1038/nature13453. Epub 2014 Jul 9. [Article]
  11. Kern J, Tran R, Alonso-Mori R, Koroidov S, Echols N, Hattne J, Ibrahim M, Gul S, Laksmono H, Sierra RG, Gildea RJ, Han G, Hellmich J, Lassalle-Kaiser B, Chatterjee R, Brewster AS, Stan CA, Glockner C, Lampe A, DiFiore D, Milathianaki D, Fry AR, Seibert MM, Koglin JE, Gallo E, Uhlig J, Sokaras D, Weng TC, Zwart PH, Skinner DE, Bogan MJ, Messerschmidt M, Glatzel P, Williams GJ, Boutet S, Adams PD, Zouni A, Messinger J, Sauter NK, Bergmann U, Yano J, Yachandra VK: Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy. Nat Commun. 2014 Jul 9;5:4371. doi: 10.1038/ncomms5371. [Article]

Associated Data

Bio-Entities
Bio-EntityType
Photosystem II protein D1 1 (Thermosynechococcus elongatus (strain BP-1))protein
primary
Drug Relations
DrugDrug groupPharmacological action?TypeActionsDetails
MonogalactosyldiacylglycerolexperimentalunknowntargetDetails